Return to main results Retrieve Phyre Job Id

Job DescriptionP06616
Confidence99.95%DateThu Jan 5 10:59:16 GMT 2012
Rank10Aligned Residues176
% Identity34%Templated1wf3a1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.88

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  DKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAAS
Query Conservation   
   
 




 









 
 
 


 

    


            

   



                  
Alig confidence 















































































Template Conservation   
     
 


  








 
                                                       
Template Sequence  EKTYSGFVAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPMDALGEFMDQEVYE
Template Known Secondary structure 



STTSSTS

S


SSS



S
TT







S
Template Predicted Secondary structure 












































Template SS confidence 















































































   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   84.....90.........100.. .......110.........120.........130.........140.........150.........160.
Predicted Secondary structure 











..























Query SS confidence 


















. .


























































Query Sequence  SSIGDVELVIFVVEGTRWT. . PDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLN
Query Conservation                     ..               
 








                      

 


  
 
Alig confidence 


















..






































...
















Template Conservation                                                              ...          

 

 
Template Sequence  ALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNKLDAAKYPEEAMKAYHE. . . LLPEAEPRMLSALDERQ
Template Known Secondary structure  TSS
STTS


GGGTTTS

GGG
SS...TSTTS

TT
Template Predicted Secondary structure 








































...










Template SS confidence 















































































   83......90.........100.........110.........120.........130.........140.. .......150.........
 
   162.......170.........180..
Predicted Secondary structure 









Query SS confidence 




















Query Sequence  VDTIAAIVRKHLPEATHHFPE
Query Conservation 

 
   
   
 
       
Alig confidence 




















Template Conservation 
  
   
   
 
     
 
Template Sequence  VAELKADLLALMPEGPFFYPE
Template Known Secondary structure  TT

B


SS

Template Predicted Secondary structure 









Template SS confidence 




















   160.........170.........180
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions