Return to main results Retrieve Phyre Job Id

Job DescriptionP06616
Confidence99.82%DateThu Jan 5 10:59:16 GMT 2012
Rank48Aligned Residues156
% Identity21%Templated1svia_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
Predicted Secondary structure 





























Query SS confidence 















































































Query Sequence  GFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGD
Query Conservation 
 




 









 
 
 


 

    


            

   



                       
Alig confidence 




































.....














.....

















Template Conservation    
 


  
 






 
                 ..... 
             .....                  
Template Sequence  PEIALAGRSNVGKSSFINSLINRQTLNFYIINDELHF. . . . . VDVPGYGFAKVSKSE. . . . . REAWGRMIETYITTREEL
Template Known Secondary structure 
BTTSST


TTT.....


B


SS
.....
TT
Template Predicted Secondary structure 













.....



.....



Template SS confidence 















































































   24.....30.........40.........50.........60 .........70..... ....80.........90...
 
   8990.........100.........110.........120.........130...... ...140.........150.........160......
Predicted Secondary structure 























..











Query SS confidence 















































. .





























Query Sequence  VELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLL. . PHLQFLASQMNFLDIVPISAETGLNVDTIA
Query Conservation                               
 








        ..              

 


  
 


 
 
Alig confidence 















































..





























Template Conservation    
    
                              
                          
 


  
 

 

 
Template Sequence  KAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAW
Template Known Secondary structure  TTS


TT


GGGS
GGGT

TTS

TTT
TT
Template Predicted Secondary structure 







































Template SS confidence 















































































   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   167..170....
Predicted Secondary structure 

Query SS confidence 







Query Sequence  AIVRKHLP
Query Conservation    
   
 
Alig confidence 







Template Conservation    
 
 
 
Template Sequence  GAIKKMIN
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 







   187..190....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions