Return to main results Retrieve Phyre Job Id

Job DescriptionP06616
Confidence99.67%DateThu Jan 5 10:59:16 GMT 2012
Rank135Aligned Residues166
% Identity19%Templated1c1ya_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  SYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSS
Query Conservation     
 




 









 
 
 


 

    


            

   



                    
Alig confidence 



























...
















































Template Conservation 

  

 


   






 
     
...                                                 
Template Sequence  MREYKLVVLGSGGVGKSALTVQFVQGIF. . . VEKYDPTIEDSYRKQVEVDCQQCMLEILDTAGTEQFTAMRDLYMKNGQG
Template Known Secondary structure 


STTSS


...

S



SSSS

SS
SSTT
S
Template Predicted Secondary structure 










...



























Template SS confidence 















































































   1........10.........20........ .30.........40.........50.........60.........70.......
 
   86...90.........100.........110.........120.........130.........140.........150.........160.....
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  IGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTI
Query Conservation                                  
 








                      

 


  
 


 
Alig confidence 















































































Template Conservation                                                                     
 




  
 
 
Template Sequence  FALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGKEQGQNLARQWCNCAFLESSAKSKINVNEI
Template Known Secondary structure  TT
T

S



TT
GGG

S
TTS

BTTTTBS
Template Predicted Secondary structure 







































Template SS confidence 















































































   78.80.........90.........100.........110.........120.........130.........140.........150.......
 
   166...170....
Predicted Secondary structure 

Query SS confidence 








Query Sequence  AAIVRKHLP
Query Conservation     
   
 
Alig confidence 








Template Conservation 
  
   
 
Template Sequence  FYDLVRQIN
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 








   158.160......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions