Job Description P06616 Confidence 99.62% Date Thu Jan 5 10:59:16 GMT 2012 Rank 183 Aligned Residues 153 % Identity 25% Template c3tr5C_ PDB info PDB header:translation Chain: C: PDB Molecule:peptide chain release factor 3; PDBTitle: structure of a peptide chain release factor 3 (prfc) from coxiella2 burnetii Resolution 2.11 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.																		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	I	H	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	M	E	E	K	R
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.																		.	.	.	.	.	.	.
Template Sequence		T	F	A	I	I	S	H	P	D	A	G	K	T	T	L	T	E	K	L	L	L	F	G	G	A	I	Q	L	A	G	T	I	K	S	R	H	A	T	S	D	W	X	E	L	E	K	Q	V	T	T	S	V	.	.	.	.	X	Q	F	P	Y	K	D	Y	L	I	N	L	L	D	T	P	G	.	.	.	.	.	.	.
Template Known Secondary structure									T	T	S	S													T									T												T	T				S	S		.	.	.	.						T	T											.	.	.	.	.	.	.
Template Predicted Secondary structure																																																						.	.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.					.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																															.																																											.	.	.	.	.	.	.	.
Query SS confidence																															.																																											.	.	.	.	.	.	.	.
Query Sequence		A	I	N	R	L	M	N	K	A	A	S	S	S	I	G	D	V	E	L	V	I	F	V	V	E	G	T	R	W	.	T	P	D	D	E	M	V	L	N	K	L	R	E	G	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	E	K	A	D	L	L	P	H	L	Q	F	L	A	.	.	.	.	.	.	.	.
Query Conservation																															.																																											.	.	.	.	.	.	.	.
Alig confidence		.	.																												.																																											.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	H	A	D	F	T	E	D	T	Y	R	T	L	T	A	V	D	S	A	L	X	V	I	D	A	A	K	G	V	E	P	R	T	I	K	L	X	E	V	C	R	L	R	H	T	P	I	X	T	F	I	N	K	X	D	R	D	T	R	P	S	I	E	L	L	D	E	I	E	S	I	L	R	I	H	C	A	P	V
Template Known Secondary structure		.	.	S	T	T									G	G	G		S								T	T	T	B	S													T	T	T										T	T	S																S							S
Template Predicted Secondary structure		.	.
Template SS confidence
				89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
																																																																						144	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	M	N	F	L	D	I	V	P	I	S
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	W	P	I	G	X	G	K	Y	F	K	G	I	Y	H	L	I	E	D	A	I	Y	L	Y	Q	P	S	E	R	I	E	G	I	N	N	P	E	L	D	K	K	L	G	D	L	A	S	E	L	R	N	E	I	E	L	V	K	G	A	S	H	P	F	E	R	E	G	Y	L	K	G	E	L	T	P	I	F	F	G	S
Template Known Secondary structure						S		T	T								T	T	T	T														T	T									T																	S											T	S								B
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	T	G	L	N	V	D	T	I	A	A	I	V	R	K	H	L	P	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	I	N	N	F	G	V	G	E	L	L	D	A	F	V	K	E	A	P	P
Template Known Secondary structure		G	G	G	T	B	S												S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions