Job Description P06616 Confidence 99.87% Date Thu Jan 5 10:59:16 GMT 2012 Rank 36 Aligned Residues 169 % Identity 26% Template c3qq5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:small gtp-binding protein; PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf Resolution 2.99 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		S	I	D	K	S	Y	C	G	F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	I	H	T	E	.	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	M	E	E	K	R	A	I	N	R	L	M	N	K
Query Conservation																																																						.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.													.																			.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Sequence		T	M	R	L	G	F	R	R	Y	I	V	V	A	G	R	R	N	V	G	K	S	S	F	M	N	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	T	D	P	V	Y	K	S	M	E	L	H	P	I	G	P	V	T	L	V	D	T	P	G	L	D	D	V	G	E	.	.	L	G	R	L	R	V	E
Template Known Secondary structure																S		S	T	T	T	T	T	T	T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T	T									S	S	T	T				T	.	.	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.														.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	S	S	S	I	G	D	V	E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E	M	V	L	N	K	L	R	E	G	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	E	K	A	D	L	L	P	H	L	Q	F	L	A	S	Q	M	N	F	L	D	I	V	P	I	S	A	E	T	G	L
Query Conservation
Alig confidence																			.																																					.	.	.
Template Conservation																			.																																					.	.	.
Template Sequence		K	A	R	R	V	F	Y	R	A	D	C	G	I	L	V	T	D	.	S	A	P	T	P	Y	E	D	D	V	V	N	L	F	K	E	M	E	I	P	F	V	V	V	V	N	K	I	D	V	L	G	E	K	A	E	.	.	.	E	L	K	G	L	Y	E	S	R	Y	E	A	K	V	L	L	V	S	A	L	Q	K	K
Template Known Secondary structure								T	S		S							S	.	S	S															T	T											T	T	T	T				T	.	.	.						S	S			T	T							S	S			T	T
Template Predicted Secondary structure																			.																																					.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	D	T	I	A	A	I	V	R	K	H	L	P	E	A	T	H	H	F	P	E	D	Y	I	T	D	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	D	D	I	G	K	T	I	S	E	I	L	P	G	D	E	E	I	P	Y	L	G	D	L	I	D	G	G
Template Known Secondary structure		S	T	T	T									S								S		S					T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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