Job Description P06616 Confidence 98.11% Date Thu Jan 5 10:59:16 GMT 2012 Rank 284 Aligned Residues 106 % Identity 14% Template c3q5dA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atlastin-1; PDBTitle: crystal structure of human atlastin-1 (residues 1-447) bound to gdp,2 crystal form 1 Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.																					30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.								.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Query Sequence		K	S	Y	C	G	F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	I	H	.	.	.	.	.	.	.	T	E	G	A	Y	Q
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.																.	.	.	.	.	.	.
Template Conservation																																																				.	.
Template Sequence		D	K	E	V	V	A	V	S	V	A	G	A	F	R	K	G	K	S	F	L	X	D	F	X	L	R	Y	X	Y	N	Q	E	S	V	D	W	V	G	D	Y	N	E	P	L	T	G	F	S	W	R	.	.	G	G	S	E	R	E	T	T	G	I	Q	I	W	S	E	I	F	L	I	N	K	P	D	G	K	K	V	A
Template Known Secondary structure		T	S	B									S	T	T	S	S																S	T	T	T	S	S			T	T	S	B			S	S		S		.	.		S	S											S	S							S	S	S
Template Predicted Secondary structure																																																				.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	Y	V	D	T	P	G	L	H	M	E	E	K	R	A	I	N	R	L	M	N	K	A	A	S	S	S	I	G	D	V	E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E	M	V	L	N	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	L	X	D	T	Q	G	T	F	D	S	Q	S	T	L	R	D	S	A	T	V	F	A	L	S	T	X	I	S	S	I	Q	V	Y	N	L	S	Q	N	V	Q	E	D	D	L	Q	H	L	Q	L	F	T	E	Y
Template Known Secondary structure												S	S																			S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions