Job Description P06616 Confidence 99.87% Date Thu Jan 5 10:59:16 GMT 2012 Rank 37 Aligned Residues 169 % Identity 25% Template c3pqcA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable gtp-binding protein engb; PDBTitle: crystal structure of thermotoga maritima ribosome biogenesis gtp-2 binding protein engb (ysxc/yiha) in complex with gdp Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	K	S	Y	C	G	F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	I	H	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	M	E	E	K	R	A	I	N	R	L	M	N	K	A	A
Query Conservation
Alig confidence																																																						.	.	.
Template Conservation																																																						.	.	.
Template Sequence		Y	P	P	P	L	K	G	E	V	A	F	V	G	R	S	N	V	G	K	S	S	L	L	N	A	L	F	N	R	K	I	A	F	V	S	K	T	P	G	K	T	R	S	I	N	F	Y	L	V	N	S	K	.	.	.	Y	Y	F	V	D	L	P	G	Y	G	Y	A	K	V	S	K	K	E	R	M	L	W	K	R	L
Template Known Secondary structure						T	T								B	T	T	S	S										T	S			S				S	S													T	T	T	.	.	.									B	S	S	S
Template Predicted Secondary structure																																																						.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.																															.	.
Query SS confidence																					.	.	.	.	.																															.	.
Query Sequence		S	S	S	I	G	D	V	E	L	V	I	F	V	V	E	G	T	R	W	.	.	.	.	.	T	P	D	D	E	M	V	L	N	K	L	R	E	G	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	E	.	.	K	A	D	L	L	P	H	L	Q	F	L	A	S	Q	M	N	F	L	D	I	V	P	I	S
Query Conservation																					.	.	.	.	.																															.	.
Alig confidence																					.	.	.	.	.																															.	.
Template Conservation
Template Sequence		V	E	D	Y	F	K	N	R	W	S	L	Q	M	V	F	L	L	V	D	G	R	I	P	P	Q	D	S	D	L	M	M	V	E	W	M	K	S	L	N	I	P	F	T	I	V	L	T	K	M	D	K	V	K	M	S	E	R	A	K	K	L	E	E	H	R	K	V	F	S	K	Y	G	E	Y	T	I	I	P	T	S
Template Known Secondary structure										T	T										T	T	S																T	T										G	G	G	S		G	G	G														S	S			S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	T	G	L	N	V	D	T	I	A	A	I	V	R	K	H	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	V	T	G	E	G	I	S	E	L	L	D	L	I	S	T	L	L	K
Template Known Secondary structure		T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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