Job Description P06616 Confidence 99.78% Date Thu Jan 5 10:59:16 GMT 2012 Rank 69 Aligned Residues 191 % Identity 17% Template c3lxwA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 1; PDBTitle: crystal structure of human gtpase imap family member 1 Resolution 2.21 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.
Query SS confidence																																																															.	.	.
Query Sequence		F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	I	H	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	M	E	E	.	.	.	K	R	A	I	N	R	L	M	N	K	A	A	S	S	S	I
Query Conservation																																																															.	.	.
Alig confidence																										.	.	.	.	.	.	.	.																														.	.	.
Template Conservation																										.	.	.	.	.	.	.	.
Template Sequence		R	L	I	L	V	G	R	T	G	A	G	K	S	A	T	G	N	S	I	L	G	Q	R	R	.	.	.	.	.	.	.	.	F	T	R	A	C	T	T	G	S	R	R	W	D	K	C	H	V	E	V	V	D	T	P	D	I	F	S	S	Q	V	S	K	T	D	P	G	C	E	E	R	G	H	C	Y	L	L	S	A
Template Known Secondary structure							S	S	T	T	S	S										T	S			.	.	.	.	.	.	.	.				S									T	T										S		S	S	T	T					S	T	T	S											T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.									.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.						.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.												.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																													.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	V	E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E	M	V	L	N	K	L	R	.	.	.	.	.	E	G	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	E	K	.	.	.	.	.	.	.	.	.	.	.	A	D	L	L	P	H	L	Q	F	L	A	S	Q	M	N	F	L	D
Query Conservation																													.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	G	P	H	A	L	L	L	V	T	Q	L	G	R	F	T	A	Q	D	Q	Q	A	V	R	Q	V	R	D	M	F	G	E	D	V	L	K	W	M	V	I	V	F	T	R	K	E	D	L	A	G	G	S	L	H	D	Y	V	S	N	T	E	N	R	A	L	R	E	L	V	A	E	C	G	G	R	V	C	A	F	D
Template Known Secondary structure		T			S								T	T	B																		G	G	G	G	G	G								G	G	G	G	T	T																						T	T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	P	I	S	A	E	T	G	L	N	V	D	T	I	A	A	I	V	R	K	H	L	P	E	A	T	H	H	F	P	E	D	Y	I	T	D	R	S	Q	R	F	M	A	S	E	I	I	R	E	K	L	M	R	F	L	G	A	E	L
Query Conservation
Alig confidence																																							.	.
Template Conservation																																							.	.
Template Sequence		N	R	A	T	G	R	E	Q	E	A	Q	V	E	Q	L	L	G	M	V	E	G	L	V	L	E	H	K	G	A	H	Y	S	N	E	V	Y	E	.	.	L	A	Q	V	L	R	W	A	G	P	E	E	R	L	R	R	V	A	E	R	V
Template Known Secondary structure		T	T																								T	T	T										.	.					G	G	G	S
Template Predicted Secondary structure																																							.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions