Job Description P06616 Confidence 99.75% Date Thu Jan 5 10:59:16 GMT 2012 Rank 87 Aligned Residues 152 % Identity 20% Template c3lvrE_ PDB info PDB header:protein transport Chain: E: PDB Molecule:arf-gap with sh3 domain, ank repeat and ph domain- PDBTitle: the crystal structure of asap3 in complex with arf6 in transition2 state soaked with calcium Resolution 3.38 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	I	H	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	M	E	E	K	R	A	I	N	R	L	M	N	K	A	A	S	S	S	I	G	D	V
Query Conservation
Alig confidence																															.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Sequence		R	I	L	M	L	G	L	D	A	A	G	K	T	T	I	L	Y	K	L	K	L	G	Q	S	V	T	T	I	P	.	.	.	.	T	V	G	F	N	V	E	T	V	T	Y	K	N	V	K	F	N	V	W	D	V	G	G	.	.	.	.	.	.	.	.	.	Q	D	K	I	R	P	L	W	R	H	Y	Y	T	G	T
Template Known Secondary structure								S	T	T	S	S											S	S							.	.	.	.		S	S									S	S											.	.	.	.	.	.	.	.	.		G	G	G	S	T	T	G	G	G	G	T	T	T
Template Predicted Secondary structure																															.	.	.	.																								.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.					.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.										.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.							.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																			.	.	.	.	.	.																										.	.
Query SS confidence																			.	.	.	.	.	.																										.	.
Query Sequence		E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E	.	.	.	.	.	.	M	V	L	N	K	L	R	E	G	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	E	.	.	K	A	D	L	L	P	H	L	Q	F	L	A	S	Q	M	N	F	L	D	I	V	P	I	S	A	E	T	G	L	N
Query Conservation																			.	.	.	.	.	.																										.	.
Alig confidence																			.	.	.	.	.	.																										.	.
Template Conservation
Template Sequence		Q	G	L	I	F	V	V	D	C	A	D	R	D	R	I	D	E	A	R	Q	E	L	H	R	I	I	N	D	R	E	M	R	D	A	I	I	L	I	F	A	N	K	Q	D	L	P	D	A	M	K	P	H	E	I	Q	E	K	L	G	L	T	R	I	R	D	R	N	W	Y	V	Q	P	S	C	A	T	S	G	D	G
Template Known Secondary structure										S	S			T	T													T	S	T	T		T	T										T	T	S	S	S											T	T		T	T			S	S								B	T	T	T	T	B	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		162	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	T	I	A	A	I	V	R	K	H	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Y	E	G	L	T	W	L	T	S	N	Y	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions