Job Description P06616 Confidence 98.90% Date Thu Jan 5 10:59:16 GMT 2012 Rank 263 Aligned Residues 173 % Identity 11% Template c3l2oB_ PDB info PDB header:protein binding/cell cycle Chain: B: PDB Molecule:f-box only protein 4; PDBTitle: structure-based mechanism of dimerization-dependent ubiquitination by2 the scffbx4 ubiquitin ligase Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																		.												.																				.	.											.	.	.	.
Query SS confidence																		.												.																				.	.											.	.	.	.
Query Sequence		S	I	D	K	S	Y	C	G	F	I	A	I	V	G	R	P	.	N	V	G	K	S	T	L	L	N	K	L	.	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	.	.	V	G	I	H	T	E	G	A	Y	Q	.	.	.	.	A	I	Y	V	D	T	P	G	L	H	M	E	E	K	R	A
Query Conservation																		.												.																				.	.											.	.	.	.
Alig confidence																		.												.																				.	.											.	.	.	.
Template Conservation
Template Sequence		Y	L	I	I	Q	N	E	P	R	F	A	M	F	G	P	G	L	E	E	L	N	T	S	L	V	L	S	L	M	S	S	E	E	L	C	P	T	A	G	L	P	Q	R	Q	I	D	G	I	G	S	G	V	N	F	Q	L	N	N	Q	H	K	F	N	I	L	I	L	Y	S	T	T	R	R	Y	S	V	I	P	Q	I
Template Known Secondary structure		T														T					S	S	S							T	T		G	G	G							S	T	T	T		S	S	S									T	T	T									S
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																					.								.
Query SS confidence																																																					.								.
Query Sequence		I	N	R	L	M	N	K	A	A	S	S	S	I	G	D	V	E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E	M	V	L	N	K	L	R	E	G	K	A	P	V	I	L	A	V	N	.	K	V	D	N	V	Q	E	.	K	A	D	L	L	P	H	L	Q	F	L	A	S	Q	M	N	F	L	D	I
Query Conservation																																																					.								.
Alig confidence																																																					.								.
Template Conservation
Template Sequence		Q	K	V	C	E	V	V	D	G	F	I	Y	V	A	N	A	E	A	H	K	R	H	E	W	Q	D	E	F	S	H	I	M	A	M	T	D	P	A	F	G	S	S	G	R	P	L	L	V	L	S	C	I	S	Q	G	D	V	K	R	M	P	C	F	Y	L	A	H	E	L	H	L	N	L	L	N	H	P	W	L	V
Template Known Secondary structure									S							B		B	T	T																							T	T										S	S	T	T	S		B										T	T	G	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	P	I	S	A	E	T	G	L	N	V	D	T	I	A	A	I	V	R	K	H	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	D	T	E	A	E	T	L	T	G	F	L	N	G	I	E	W	I	L	E	E	V	E
Template Known Secondary structure						T	T	T		T	T												S
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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