Job Description P06616 Confidence 99.47% Date Thu Jan 5 10:59:16 GMT 2012 Rank 234 Aligned Residues 142 % Identity 24% Template c2zejA_ PDB info PDB header:transferase Chain: A: PDB Molecule:leucine-rich repeat kinase 2; PDBTitle: structure of the roc domain from the parkinson's disease-associated2 leucine-rich repeat kinase 2 reveals a dimeric gtpase Resolution 2.00 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	I	H	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	M	E	E	K	R	A	I	N	R	L	M	N	K	A	A	S	S	S	I	G	D
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.														.	.											.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.														.	.											.	.	.	.	.	.	.	.	.
Template Sequence		X	K	L	X	I	V	G	N	T	G	S	G	K	T	T	L	L	Q	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	X	K	T	V	G	I	D	V	K	D	W	P	I	.	.	L	V	L	N	V	W	D	F	A	G	.	.	.	.	.	.	.	.	.	R	E	E	F	Y	S	T	H	P	H	F	X	T	Q
Template Known Secondary structure								S		T	T	S	S									.	.	.	.	.	.	.	.	.	.	.	.	T				S									.	.										S	.	.	.	.	.	.	.	.	.						T	T	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.														.	.											.	.	.	.	.	.	.	.	.
Template SS confidence
		1335	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.													.	.	.	.	.	1360	.	.	.	.	.	.	.			.	.	1370	.	.	.	.	.	.	.										.	.	1380	.	.	.	.	.	.	.	.	.	1390	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110						.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																								.	.	.	.	.																							.	.	.
Query SS confidence																								.	.	.	.	.																							.	.	.
Query Sequence		V	E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E	M	V	L	N	.	.	.	.	.	K	L	R	E	G	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	E	K	.	.	.	A	D	L	L	P	H	L	Q	F	L	A	S	Q	M	N	F	L	D	I	V	P	I	S	A	E	T	G	L
Query Conservation																								.	.	.	.	.																							.	.	.
Alig confidence																								.	.	.	.	.																							.	.	.
Template Conservation
Template Sequence		R	A	L	Y	L	A	V	Y	D	L	S	K	G	Q	A	E	V	D	A	X	K	P	W	L	F	N	I	K	A	R	A	S	S	S	P	V	I	L	V	G	T	H	L	D	V	S	D	E	K	Q	R	K	A	C	X	S	K	I	T	K	E	L	L	N	K	R	G	F	P	A	I	R	D	Y	H	F	V	N	A	T
Template Known Secondary structure		S									G	G	G							T													T	T										G	G	G																	T	T	T		T	T	S											T	T
Template Predicted Secondary structure
Template SS confidence
		1412	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.
		161	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	D	T	I	A	A	I	V	R	K	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	S	D	A	L	A	K	L	R	K	T	I
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		1492	.	.	.	.	.	.	.	1500	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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