Job Description P06616 Confidence 99.89% Date Thu Jan 5 10:59:16 GMT 2012 Rank 28 Aligned Residues 197 % Identity 17% Template c2xtpA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of nucleotide-free human gimap2, amino2 acid residues 1-260 Resolution 1.50 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																																		.																									.	.
Query SS confidence																																		.																									.	.
Query Sequence		I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	.	T	R	H	R	I	V	G	I	H	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	.	.	H	M	E	E	K	R	A	I	N	R	L	M	N	K	A	A	S	S	S	I	G
Query Conservation																																		.																									.	.
Alig confidence																																		.																									.	.
Template Conservation
Template Sequence		I	I	L	V	G	K	T	G	T	G	K	S	A	A	G	N	S	I	L	R	K	Q	A	F	E	S	K	L	G	S	Q	T	L	T	K	T	C	S	K	S	Q	G	S	W	G	N	R	E	I	V	I	I	D	T	P	D	X	F	S	W	K	D	H	C	E	A	L	Y	K	E	V	Q	R	C	Y	L	L	S	A	P
Template Known Secondary structure								T	T	S											T	S			S				T	T	S						S									T	T										G	G	G	G	S	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.												.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																											.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E	M	V	L	N	K	L	.	.	.	.	.	R	E	G	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	E	K	A	D	.	.	.	.	.	.	.	.	.	.	.	L	L	P	H	L	Q	F	L	A	S	Q	M	N	F	L	D	I
Query Conservation																											.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	P	H	V	L	L	L	V	T	Q	L	G	R	Y	T	S	Q	D	Q	Q	A	A	Q	R	V	K	E	I	F	G	E	D	A	X	G	H	T	I	V	L	F	T	H	K	E	D	L	N	G	G	S	L	X	D	Y	X	H	D	S	D	N	K	A	L	S	K	L	V	A	A	C	G	G	R	I	C	A	F	N	N
Template Known Secondary structure				S								T	T																			G	G	G	G	G	G								G	G	G	G	T	T																						T	T	T							T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		V	P	I	S	A	E	T	G	L	N	V	D	T	I	A	A	I	V	R	K	H	L	P	E	A	T	.	H	H	F	P	E	D	Y	I	T	D	R	S	Q	R	F	M	A	S	E	I	I	R	E	K	L	M	R	F	L	G	A	E	L	P	Y	S
Query Conservation																												.
Alig confidence																												.																.	.	.	.	.	.
Template Conservation																																												.	.	.	.	.	.
Template Sequence		R	A	E	G	S	N	Q	D	D	Q	V	K	E	L	X	D	C	I	E	D	L	L	X	E	K	N	G	D	H	Y	T	N	G	L	Y	S	L	I	V	K	E	F	.	.	.	.	.	.	K	Q	S	L	I	K	Y	X	E	T	Q	R	S	Y	T
Template Known Secondary structure		T																								T	T	T																.	.	.	.	.	.
Template Predicted Secondary structure																																												.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.							.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions