Job Description P06616 Confidence 99.84% Date Thu Jan 5 10:59:16 GMT 2012 Rank 43 Aligned Residues 185 % Identity 17% Template c2xtnA_ PDB info PDB header:immune system Chain: A: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of gtp-bound human gimap2, amino acid2 residues 1-234 Resolution 1.90 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure																																	.																																.	.
Query SS confidence																																	.																																.	.
Query Sequence		F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	.	Q	T	T	R	H	R	I	V	G	I	H	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	M	E	E	K	.	.	R	A	I	N	R	L	M	N	K	A	A	S	S	S	I
Query Conservation																																	.																																.	.
Alig confidence																																	.																																.	.
Template Conservation
Template Sequence		R	I	I	L	V	G	K	T	G	T	G	K	S	A	A	G	N	S	I	L	R	K	Q	A	F	E	S	K	L	G	S	Q	T	L	T	K	T	C	S	K	S	Q	G	S	W	G	N	R	E	I	V	I	I	D	T	P	D	M	F	S	W	K	D	H	C	E	A	L	Y	K	E	V	Q	R	C	Y	L	L	S	A
Template Known Secondary structure							S	S	T	T	S	S										T	S			S						S	S					S									T	T										S	T	T	S	S	S				T	T													T
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.						.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																														.	.	.	.	.																									.	.	.	.	.																.	.	.
Query SS confidence																														.	.	.	.	.																									.	.	.	.	.																.	.	.
Query Sequence		G	D	V	E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E	M	V	L	N	K	L	R	E	.	.	.	.	.	G	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	E	K	A	D	L	L	P	H	.	.	.	.	.	L	Q	F	L	A	S	Q	M	N	F	L	D	I	V	P	.	.	.
Query Conservation																														.	.	.	.	.																									.	.	.	.	.																.	.	.
Alig confidence																														.	.	.	.	.																									.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		P	G	P	H	V	L	L	L	V	T	Q	L	G	R	Y	T	S	Q	D	Q	Q	A	A	Q	R	V	K	E	I	F	G	E	D	A	M	G	H	T	I	V	L	F	T	H	K	E	D	L	G	S	L	M	D	Y	M	H	D	S	D	N	K	A	L	S	K	L	V	A	A	C	G	G	R	I	C	A	F	N	N	R
Template Known Secondary structure		T			S								T	T																			T	T	G	G	G	G								G	G	G																							T	T	T							T	T
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
			154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	I	S	A	E	T	G	L	N	V	D	T	I	A	A	I	V	R	K	H	L	P	E	A	T	H	H	F	P	E	D	Y	I	T	D	R	S	Q	R	F	M	A	S	E	I	I	R	E	K	L
Query Conservation		.
Alig confidence		.																																.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.
Template Sequence		A	E	G	S	N	Q	D	D	Q	V	K	E	L	M	D	C	I	E	D	L	L	M	E	K	N	G	D	H	Y	T	N	G	.	.	.	.	.	.	.	.	L	Y	S	L	I	Q	R	S	K	C
Template Known Secondary structure																									T	T	T							.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.									.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions