Job Description P06616 Confidence 99.76% Date Thu Jan 5 10:59:16 GMT 2012 Rank 75 Aligned Residues 151 % Identity 15% Template c2wsmB_ PDB info PDB header:metal binding protein Chain: B: PDB Molecule:hydrogenase expression/formation protein (hypb); PDBTitle: crystal structure of hydrogenase maturation factor hypb from2 archaeoglobus fulgidus Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.																	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	S	Y	C	G	F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																		.																																														.	.
Template Sequence		R	E	S	G	T	V	A	V	N	I	M	G	A	I	G	S	G	K	T	L	L	I	E	R	T	I	E	R	I	G	N	E	.	V	K	I	G	A	M	L	G	D	A	E	A	I	S	T	G	K	E	C	H	L	D	A	H	M	I	Y	H	R	L	K	K	F	S	D	C	D	L	L	L	I	E	N	V	G	.	.
Template Known Secondary structure				T	T										T	T	S														T	T	T	.	S															T	T		S	S										T	G	G	G	T	T		S									.	.
Template Predicted Secondary structure																																		.																																														.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		M	E	E	K	R	A	I	N	R	L	M	N	K	A	A	S	S	S	I	G	D	V	E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E	M	V	L	N	K	L	R	E	G	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	E	K	A	.	D	L	L	P	H	L	Q	F	L	A	S	Q	M
Query Conservation																																																																				.
Alig confidence		.	.	.	.	.	.	.	.	.	.																																				.	.	.																			.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	N	L	I	C	P	V	D	F	D	L	G	E	N	Y	R	V	V	M	V	S	V	T	E	G	D	D	V	V	E	K	H	P	E	I	F	.	.	.	R	V	A	D	L	I	V	I	N	K	V	A	L	A	E	A	V	G	A	D	V	E	K	M	K	A	D	A	K	L	I	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.		S	S	G	G	G	G				S		S								G	G	G		T	T										.	.	.	T	T		S							G	G	G					T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																				.	.	.
Template SS confidence
												119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.				.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	L	D	I	V	P	I	S	A	E	T	G	L	N	V	D	T	I	A	A	I	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	A	K	I	I	E	M	D	L	K	T	G	K	G	F	E	E	W	I	D	F	L	R
Template Known Secondary structure		T	T	S						B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions