Job Description P06616 Confidence 99.72% Date Thu Jan 5 10:59:16 GMT 2012 Rank 92 Aligned Residues 158 % Identity 16% Template c2rexD_ PDB info PDB header:signaling protein/lipoprotein Chain: D: PDB Molecule:rho-related gtp-binding protein rho6; PDBTitle: crystal structure of the effector domain of plxnb1 bound with rnd12 gtpase Resolution 2.30 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	I	H	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	M	E	E	K	R	A	I	N	R	L	M	N	K	A	A	S	S	S	I	G	D	V
Query Conservation
Alig confidence																																																										.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.
Template Sequence		K	L	V	L	V	G	D	V	Q	C	G	K	T	A	M	L	Q	V	L	A	K	D	C	Y	P	E	T	Y	V	P	T	V	F	E	N	Y	T	A	C	L	E	T	E	E	Q	R	V	E	L	S	L	W	D	T	S	G	.	.	.	.	.	.	S	P	Y	Y	D	N	V	R	P	L	C	Y	S	D	S	D	A	V
Template Known Secondary structure								S	T	T	S	S											S					S					S											S	S													.	.	.	.	.	.	S	G	G	G	T	T	T	G	G	G	G	G	T	T		S
Template Predicted Secondary structure																																																										.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.													.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E	M	V	L	N	K	L	R	E	G	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	E	K	A	D	L	L	P	.	.	.	.	.	.	.	.	.	.	.	.	H	L	Q	F	L	A	S	Q	M	N	F	L	D	I	V	P	I	S	A	E
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	C	F	D	I	S	R	P	E	T	V	A	L	K	K	W	R	T	E	I	L	D	Y	C	P	S	T	R	V	L	L	I	G	C	K	T	D	L	R	T	D	L	S	T	L	M	E	L	S	H	Q	K	Q	A	P	I	S	Y	E	Q	G	C	A	I	A	K	Q	L	G	A	E	I	Y	L	E	G	S	A	F
Template Known Secondary structure							T	T		T	T	T															T	T	S									G	G	G	G	G											T	T																T	T		S							T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		158	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		T	G	L	.	N	V	D	T	I	A	A	I	V	R	K	H	L
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		T	S	E	K	S	I	H	S	I	F	R	T	A	S	M	L	C
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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