Return to main results Retrieve Phyre Job Id

Job DescriptionP06616
Confidence98.25%DateThu Jan 5 10:59:16 GMT 2012
Rank279Aligned Residues157
% Identity14%Templatec2qy9A_
PDB info PDB header:protein transportChain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20......... 30.........40.. .......50..
Predicted Secondary structure 














......









......................
Query SS confidence 




























. . . . . .












. . . . . . . . . . . . . . . . . . . . . .









Query Sequence  MSIDKSYCGFIAIVGRPNVGKSTLLNKLL. . . . . . GQKISITSRKAQT. . . . . . . . . . . . . . . . . . . . . . TRHRIVGIHT
Query Conservation 
   
   
 




 









 
 ......
 


 

    
......................

        
Alig confidence 




























......












......................









Template Conservation           

  

  
 




 



      
  
 

  
  
  
  

   
    
                
Template Sequence  LNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGADSASVIF
Template Known Secondary structure 



S
TT

TTS
TTT




TT
TT



STT

Template Predicted Secondary structure 































Template SS confidence 















































































   286...290.........300.........310.........320.........330.........340.........350.........360.....
 
   53......60.........70.........80........ .90.........100.........110.........120..
Predicted Secondary structure  .......











...
















Query SS confidence  . . . . . . .



































. . .

































Query Sequence  . . . . . . . EGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGD. . . VELVIFVVEGTRWTPDDEMVLNKLREGKAPVILA
Query Conservation  .......    

   



                       ...                             
 


Alig confidence  .......



































...





























.


Template Conservation   
         
 







      
  

  
           
    


 
                    .  
Template Sequence  DAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLT. GIT
Template Known Secondary structure  TT
S




GGGTTT
TT

SGGGTS


.
Template Predicted Secondary structure 



























.
Template SS confidence 















































































   366...370.........380.........390.........400.........410.........420.........430.........440. ...
 
   123......130.........140.........150.........160.....
Predicted Secondary structure 


















Query SS confidence 










































Query Sequence  VNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTI
Query Conservation 





                      

 


  
 


 
Alig confidence 



















.....







..







Template Conservation 






   
  
      ..... 


  
 .. 

 
 

Template Sequence  LTKLDGTAKGGVIFSVADQF. . . . . GIPIRYIG. . VGERIEDL
Template Known Secondary structure 

TT
TTTT.....


..
SSSGGG
Template Predicted Secondary structure 






.....


..







Template SS confidence 










































   445....450.........460.... .....470.. .......480
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions