Job Description P06616 Confidence 99.84% Date Thu Jan 5 10:59:16 GMT 2012 Rank 41 Aligned Residues 189 % Identity 16% Template c2j3eA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:t7i23.11 protein; PDBTitle: dimerization is important for the gtpase activity of2 chloroplast translocon components attoc33 and pstoc159 Resolution 3.2 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	I	D	K	S	Y	C	G	F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	I	H	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	M	E	E	K	R	A	I	N	R	L	M	N	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	Q	K	D	M	N	S	M	T	V	L	V	L	G	K	G	G	V	G	K	S	S	T	V	N	S	L	I	G	E	Q	V	V	R	V	S	P	F	Q	A	E	G	L	R	P	V	M	V	S	R	T	M	G	G	F	T	I	N	I	I	D	T	P	G	L	V	E	A	G	Y	V	N	H	Q	A	L	E	L	I
Template Known Secondary structure					T	T											S	T	T	S	S										S	S	S		S				S			S				S									T	T											S	B		S	S	S	B
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.			100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.						.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																.	.	.	.	.	.
Predicted Secondary structure																					.	.																	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.																	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	S	S	S	I	G	D	V	E	L	V	I	F	V	V	E	G	T	.	.	R	W	T	P	D	D	E	M	V	L	N	K	L	R	E	G	.	.	.	.	.	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	L	L	P	H
Query Conservation																					.	.																	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.																	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	F	L	V	N	R	T	I	D	V	L	L	Y	V	D	R	L	D	V	Y	A	V	D	E	L	D	K	Q	V	V	I	A	I	T	Q	T	F	G	K	E	I	W	C	K	T	L	L	V	L	T	H	A	Q	F	S	P	P	D	E	L	S	Y	E	T	F	S	S	K	R	S	D	S	L	L	K	T	I	R	A
Template Known Secondary structure					T	S	S			B									T	T						T													S							T								T	T				T	T	S
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.							.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.
Query Sequence		L	Q	F	L	A	S	Q	M	N	F	L	D	I	V	P	I	S	A	E	T	G	L	N	V	D	T	I	A	A	I	V	R	K	H	L	P	E	A	T	H	H	F	P	E	.	.	.	.	.	.	D	Y	I	T	D	R	S
Query Conservation																																														.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.
Template Conservation
Template Sequence		G	S	K	M	R	K	Q	E	F	E	D	S	A	I	A	V	V	Y	A	E	N	S	G	R	C	S	K	N	D	K	D	E	K	A	L	P	N	G	E	A	W	I	P	N	L	V	K	A	I	T	D	V	A	T	N	Q	R
Template Known Secondary structure			S	G	G	G	T	T	T														S	T	T					T	T	S			B		S	S	S	S	B															S
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions