Job Description P06616 Confidence 99.66% Date Thu Jan 5 10:59:16 GMT 2012 Rank 138 Aligned Residues 158 % Identity 16% Template c2h18A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:adp-ribosylation factor-like protein 8a; PDBTitle: structure of human adp-ribosylation factor-like 10b (arl10b) Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	Y	C	G	F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	I	H	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	M	E	E	K	R	A	I	N	R	L	M	N	K	A	A	S	S
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.																.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.																.	.	.
Template Sequence		W	K	E	E	M	E	L	T	L	V	G	L	Q	Y	S	G	K	T	T	F	V	N	V	I	A	S	G	Q	F	N	E	D	M	I	N	M	R	K	.	.	.	.	.	.	.	.	I	T	K	G	N	V	T	I	K	L	W	D	I	G	G	.	.	.	Q	P	R	F	R	S	M	W	E	R	Y	C	R	G	V	S
Template Known Secondary structure			T	S									S	T	T	S	S									T	T	T												.	.	.	.	.	.	.	.				T	T								S	S		.	.	.												T	T	T		S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.																.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.									.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		S	I	G	D	V	E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E	M	V	L	N	K	L	R	E	G	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	E	K	A	D	L	L	P	H	L	Q	F	L	A	S	Q	.	.	M	N	F	L	D	I	V	P	I	S	A	E	T	G	L	N	V
Query Conservation																																																															.	.
Alig confidence																																																															.	.
Template Conservation
Template Sequence		A	I	V	Y	M	V	D	A	A	D	Q	E	K	I	E	A	S	K	N	E	L	H	N	L	L	D	K	P	Q	L	Q	G	I	P	V	L	V	L	G	N	K	R	D	L	P	G	A	L	D	E	K	E	L	I	E	K	M	N	L	S	A	I	Q	D	R	E	I	C	C	Y	S	I	S	C	K	E	K	D	N	I
Template Known Secondary structure									T	T		G	G	G													T		G	G	G	T	T										T	T	S	T	T											T	T	G	G	G			S	S								B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		163	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	I	A	A	I	V	R	K	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	T	L	Q	W	L	I	Q	H	S
Template Known Secondary structure											T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions