Job Description P06616 Confidence 99.78% Date Thu Jan 5 10:59:16 GMT 2012 Rank 65 Aligned Residues 145 % Identity 14% Template c2elfA_ PDB info PDB header:translation Chain: A: PDB Molecule:protein translation elongation factor 1a; PDBTitle: crystal structure of the selb-like elongation factor ef-pyl2 from methanosarcina mazei Resolution 1.70 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	I	H	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	M	E	E	K	R	A	I	N	R	L	M	N	K	A	A	S	S	S	I	G	D	V
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template Sequence		N	V	A	I	I	G	T	E	K	S	G	R	T	S	L	A	A	N	L	.	.	.	.	.	.	.	.	.	G	K	K	G	T	S	S	D	I	T	X	Y	N	N	D	K	E	G	R	N	X	V	F	V	D	A	H	S	.	.	.	.	.	.	.	.	.	Y	P	K	T	L	K	S	L	I	T	A	L	N	I	S
Template Known Secondary structure								S	T	T	S	S							T	T	.	.	.	.	.	.	.	.	.	S						S	S	S							S	S	S	S								T	T	.	.	.	.	.	.	.	.	.	T	T	T											T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.										.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.										50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.																														.	.	.	.	.													.	.	.	.
Query SS confidence																															.																														.	.	.	.	.													.	.	.	.
Query Sequence		E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E	M	V	L	N	K	L	R	E	G	K	A	P	.	V	I	L	A	V	N	K	V	D	N	V	Q	E	K	A	D	L	L	P	H	L	Q	F	L	A	S	Q	M	N	.	.	.	.	.	F	L	D	I	V	P	I	S	A	E	T	G	.	.	.	.
Query Conservation																															.																														.	.	.	.	.													.	.	.	.
Alig confidence																															.												.																		.	.	.	.	.													.	.	.	.
Template Conservation																																											.
Template Sequence		D	I	A	V	L	C	I	P	P	Q	G	L	D	A	H	T	G	E	C	I	I	A	L	D	L	L	G	F	K	H	G	I	I	A	L	T	R	S	D	S	T	.	H	X	H	A	I	D	E	L	K	A	K	L	K	V	I	T	S	G	T	V	L	Q	D	W	E	C	I	S	L	N	T	N	K	S	A	K	N	P
Template Known Secondary structure		S								T	T																T	T											G	G	G	S	.																T	T	T	S	T	T	T	T										T	T	S	S	S	T
Template Predicted Secondary structure																																											.
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
			160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	L	N	V	D	T	I	A	A	I	V	R	K	H	L
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		F	E	G	V	D	E	L	K	A	R	I	N	E	V	A
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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