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Job DescriptionP06616
Confidence99.75%DateThu Jan 5 10:59:16 GMT 2012
Rank77Aligned Residues157
% Identity20%Templatec2dy1A_
PDB info PDB header:signaling protein, translationChain: A: PDB Molecule:elongation factor g; PDBTitle: crystal structure of ef-g-2 from thermus thermophilus
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  FIAIVGRPNVGKSTLLNKLLGQKISITSR. . . . . . . . . . . . . . . . . KAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKR
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Template Sequence  TVALVGHAGSGKTTLTEALLYKTGAKERRGRVEEGTTTTDYTPEAKLHRTTVRTGVAPLLFRGHRVFLLDAPG. . . . . . .
Template Known Secondary structure  STTSSTTSSSS


GGGT

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STTS

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Query Sequence  AINRLMNKAASSSIGDVELVIFVVEGTR. WTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPH. . . . . . . . . . . . .
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Template Sequence  . . YGDFVGEIRGALEAADAALVAVSAEAGVQVGTERAWTVAERLGLPRMVVVTKLDKGGDYYALLEDLRSTLGPILPIDL
Template Known Secondary structure  ..SGGG
STTT
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GGG



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   84.....90.........100.........110.........120.........130.........140.........150.........160.
 
   139140..
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Template Sequence  PLYEGGKWVGLIDVFHGKAYRYENGEEREAEVPPEERERVQRFRQEVLEAIVETDEGLLEKYLEGEEVTGEALEKAFHEA
Template Known Secondary structure  TTTTTTTT


GGGTT
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   143......150.........160.........170.....
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Query Sequence  ASQMNFLDIVPISAETGLNVDTIAAIVRKHLPE
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Template Sequence  VRRGLLYPVALASGEREIGVLPLLELILEALPS
Template Known Secondary structure  TTS

BTTTTBSS

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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