Job Description P06616 Confidence 99.64% Date Thu Jan 5 10:59:16 GMT 2012 Rank 166 Aligned Residues 163 % Identity 23% Template c2dwqB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:gtp-binding protein; PDBTitle: thermus thermophilus ychf gtp-binding protein Resolution 2.95 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.													50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Query Sequence		F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	.	.	.	.	.	.	.	.	.	.	.	.	I	H	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	.	.	.	.	.	.	.	.	.	.
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Alig confidence																									.																	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.
Template Conservation																									.
Template Sequence		A	V	G	I	V	G	L	P	N	V	G	K	S	T	L	F	N	A	L	T	R	A	N	.	A	L	A	K	N	V	G	V	V	P	L	E	D	E	R	L	Y	A	L	Q	R	T	F	A	K	G	E	R	V	P	P	V	V	P	T	H	V	E	F	V	D	I	A	G	L	V	N	Q	F	L	A	H	I	R	E	V
Template Known Secondary structure									S	S	S	S													.	T																						T		B	T	T	B														T	T	T	T											S
Template Predicted Secondary structure																									.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
																																											68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	E	E	K	R	A	I	N	R	L	M	N	K	A	A	S	S	S	I	G	D	V	E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	I	A	H	V	L	R	C	F	P	D	P	L	E	D	A	E	V	V	E	T	E	L	L	L	A	D	L	A	T	L	E	R	R	L	E	R	L	R	K	E	A	R	A	D	R	E	R	L	P	L	L	E	A	A	E	G	L	Y	V	H	L	Q	E	G	K	P	A	R	T	F	P	P	S	E	A	V	A	R
Template Known Secondary structure		S																																													S	G	G	G																T	T			G	G	G	S				S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.																							.	.	160	.	.
Predicted Secondary structure																																								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	L	N	K	L	R	E	G	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	E	K	A	D	L	L	P	H	L	Q	F	L	A	S	.	.	Q	M	N	F	L	D	I	V	P	I	S	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	L	N	V
Query Conservation																																								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	K	E	T	P	L	L	T	A	K	P	V	I	Y	V	A	N	V	A	E	E	D	L	P	D	G	R	G	N	P	Q	V	E	A	V	R	R	K	A	L	E	E	G	A	E	V	V	V	V	S	A	R	L	E	A	E	L	A	E	L	S	G	E	E	A	R	E	L	L	A	A	Y	G	L	Q	E	S	G	L
Template Known Secondary structure						S			G	G	G	S										T	T	T	T	T	T	T	T	T															T		B												T	T	T	S	T											T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		163	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	I	A	A	I	V	R	K	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	R	L	A	R	A	G	Y	R	A	L
Template Known Secondary structure												T
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions