Job Description P06616 Confidence 97.87% Date Thu Jan 5 10:59:16 GMT 2012 Rank 289 Aligned Residues 125 % Identity 22% Template c2cnwF_ PDB info PDB header:signal recognition Chain: F: PDB Molecule:cell division protein ftsy; PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy Resolution 2.39 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.							30	.	.	.	.	.	.	.	.	.	40	.									.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.													.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.													.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	I	D	K	S	Y	C	G	F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	.	.	.	.	.	.	G	Q	K	I	S	I	T	S	R	K	A	Q	.	.	.	.	.	.	.	.	T	T	R	H	R	I	V	G	I	H	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																														.	.	.	.	.	.													.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.													.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	P	V	E	P	K	G	R	V	V	L	V	V	G	V	N	G	V	G	K	T	T	T	I	A	K	L	G	R	Y	Y	Q	N	L	G	K	K	V	M	F	C	A	G	D	T	F	R	A	A	G	G	T	Q	L	S	E	W	G	K	R	L	S	I	P	V	I	Q	G	P	E	G	T	D	P	A	A	L	A	Y	D
Template Known Secondary structure							S	S	S							S	T	T	S	S														T	T	T											S	S	T	T													T								T	T	S
Template Predicted Secondary structure
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
									54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																					.	.	.
Query SS confidence		.	.	.	.	.	.	.																																					.	.	.
Query Sequence		.	.	.	.	.	.	.	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	M	E	E	K	R	A	I	N	R	L	M	N	K	A	A	S	S	S	I	G	D	V	.	.	.	E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E	M	V	L	N	K	L	R	E	G	K	A	P	V	I	L	A	V
Query Conservation		.	.	.	.	.	.	.																																					.	.	.
Alig confidence		.	.	.	.	.	.	.																																					.	.	.																														.
Template Conservation																																																																													.
Template Sequence		A	V	Q	A	M	K	A	R	G	Y	D	L	L	F	V	D	T	A	G	R	L	H	T	K	H	N	L	M	E	E	L	K	K	V	K	R	A	I	A	K	A	D	P	E	E	P	K	E	V	W	L	V	L	D	A	V	T	G	Q	N	G	L	E	Q	A	K	K	F	H	E	A	V	G	L	T	.	G	V	I	V
Template Known Secondary structure									T	T		S											T	T																				T	T											T	T			T																S	.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.
		124	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K	L	D
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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