Job Description P06616 Confidence 99.96% Date Thu Jan 5 10:59:16 GMT 2012 Rank 7 Aligned Residues 197 % Identity 26% Template c1xzqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable trna modification gtpase trme; PDBTitle: structure of the gtp-binding protein trme from thermotoga2 maritima complexed with 5-formyl-thf Resolution 2.90 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	I	H	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	M	E	E	K	R	A	I	N	R	L	M	N	K	A	A	S	S	S	I	G	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	V	I	V	G	K	P	N	V	G	K	S	T	L	L	N	R	L	L	N	E	D	R	A	I	V	T	D	I	P	G	T	T	R	D	V	I	S	E	E	I	V	I	R	G	I	L	F	R	I	V	D	T	A	G	V	R	S	E	T	N	D	L	V	E	R	L	G	I	E	R	T	L	Q	E	I	E	K	A
Template Known Secondary structure									T	T	G	G	G	S										T	B										S			S								T	T								S	S				S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E	M	V	L	N	K	L	R	E	G	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	E	K	A	D	L	L	P	H	L	Q	F	L	A	S	Q	M	N	F	L	D	I	V	P	I	S	A	E	T	G	L	N	V	D	T	I	A	A	I	V
Query Conservation
Alig confidence															.																																.	.	.	.
Template Conservation															.																																.	.	.	.
Template Sequence		D	I	V	L	F	V	L	D	A	S	S	P	L	.	D	E	E	D	R	K	I	L	E	R	I	K	N	K	R	Y	L	V	V	I	N	K	V	D	V	V	E	K	I	N	E	.	.	.	.	E	E	I	K	N	K	L	G	T	D	R	H	M	V	K	I	S	A	L	K	G	E	G	L	E	K	L	E	E	S	I
Template Known Secondary structure		S								S	S	S			.											G	G	G	S	S									S	S				S			.	.	.	.							T	S		S	T	T						T	T	T	T
Template Predicted Secondary structure															.																																.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.					.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		R	K	H	L	P	E	A	T	H	H	F	P	E	D	Y	I	T	D	R	S	Q	R	F	M	A	S	E	I	I	R	.	.	E	K	L	M	R	F	L	G	A	E	L	P
Query Conservation																																.	.
Alig confidence																																.	.
Template Conservation
Template Sequence		Y	R	E	T	Q	E	I	F	E	R	G	S	D	S	L	I	T	N	L	R	Q	K	Q	L	L	E	N	V	K	G	H	L	E	D	A	I	K	S	L	K	E	G	M	P
Template Known Secondary structure					T								T	T		S			S																							T	T
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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