Job Description P06616 Confidence 99.93% Date Thu Jan 5 10:59:16 GMT 2012 Rank 16 Aligned Residues 164 % Identity 32% Template c1mkyA_ PDB info PDB header:ligand binding protein Chain: A: PDB Molecule:probable gtp-binding protein enga; PDBTitle: structural analysis of the domain interactions in der, a2 switch protein containing two gtpase domains Resolution 1.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	I	H	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	M	E	E	K	R	A	I	N	R	L	M	N	K	A	A	S	S	S	I	G	D
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	T	V	L	I	V	G	R	P	N	V	G	K	S	T	L	F	N	K	L	V	K	D	P	V	Q	D	T	V	E	W	Y	G	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	L	V	D	T	C	G	V	F	D	N	P	Q	D	I	I	S	Q	K	X	K	E	V	T	L	N	X	I	R	E
Template Known Secondary structure										T	T	S	S													S							T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T	T	S	S	G	G	G															T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.															.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		V	E	L	V	I	F	V	V	E	G	T	R	.	W	T	P	D	D	E	M	V	L	N	K	L	R	E	G	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	E	K	A	D	L	L	P	H	L	Q	F	L	A	S	Q	M	N	F	L	D	I	V	P	I	S	A	E	T	G	L	N	V	D	T	I	A	A
Query Conservation														.
Alig confidence														.																														.	.	.
Template Conservation																																												.	.	.
Template Sequence		A	D	L	V	L	F	V	V	D	G	K	R	G	I	T	K	E	D	E	S	L	A	D	F	L	R	K	S	T	V	D	T	I	L	V	A	N	K	A	E	N	L	.	.	.	R	E	F	E	R	E	V	K	P	E	L	Y	S	L	G	F	G	E	P	I	P	V	S	A	E	H	N	I	N	L	D	T	X	L	E
Template Known Secondary structure			S								T	T	T																	T									S			S		.	.	.							T					G	G	G	S	S		S					B	T	T	T	T	B	S
Template Predicted Secondary structure																																												.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	R	K	H	L	P	E	A	T	H	H	F	P	E	D	Y	I	T	D	R	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	I	K	K	L	E	E	K	G	L	D	L	E	S	K	P	E	I	T	D	A
Template Known Secondary structure										T	T			S	S	S						S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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