Job Description P06616 Confidence 99.71% Date Thu Jan 5 10:59:16 GMT 2012 Rank 102 Aligned Residues 156 % Identity 16% Template c1m2oD_ PDB info PDB header:protein transport/signaling protein Chain: D: PDB Molecule:gtp-binding protein sar1; PDBTitle: crystal structure of the sec23-sar1 complex Resolution 2.50 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	I	A	I	V	G	R	P	N	V	G	K	S	T	L	L	N	K	L	L	G	Q	K	I	S	I	T	S	R	K	A	Q	T	T	R	H	R	I	V	G	I	H	T	E	G	A	Y	Q	A	I	Y	V	D	T	P	G	L	H	M	E	E	K	R	A	I	N	R	L	M	N	K	A	A	S	S	S	I	G	D
Query Conservation
Alig confidence																																											.	.	.	.													.	.	.
Template Conservation																																											.	.	.	.													.	.	.
Template Sequence		G	K	L	L	F	L	G	L	D	N	A	G	K	T	T	L	L	H	M	L	K	N	D	R	L	A	T	L	Q	P	T	W	H	P	T	S	E	E	L	A	I	.	.	.	.	G	N	I	K	F	T	T	F	D	L	G	G	.	.	.	H	I	Q	A	R	R	L	W	K	D	Y	F	P	E	V	N	G	I	V	F
Template Known Secondary structure									S	T	T	S	S										T	S										S									.	.	.	.	S	S	S										.	.	.	S	S	G	G	G	G	T						T	T
Template Predicted Secondary structure																																											.	.	.	.													.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.					.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																												.	.
Query SS confidence																																												.	.
Query Sequence		V	E	L	V	I	F	V	V	E	G	T	R	W	T	P	D	D	E	M	V	L	N	K	L	R	E	G	K	A	P	V	I	L	A	V	N	K	V	D	N	V	Q	.	.	E	K	A	D	L	L	P	H	L	Q	F	L	A	S	Q	M	N	F	L	D	I	V	P	I	S	A	E	T	G	L	N	V	D	T	I	A
Query Conservation																																												.	.
Alig confidence																																												.	.
Template Conservation
Template Sequence		L	V	D	A	A	D	P	E	R	F	D	E	A	R	V	E	L	D	A	L	F	N	I	A	E	L	K	D	V	P	F	V	I	L	G	N	K	I	D	A	P	N	A	V	S	E	A	E	L	R	S	A	L	G	L	L	N	T	T	G	R	P	V	E	V	F	M	C	S	V	V	M	R	N	G	Y	L	E	A	F
Template Known Secondary structure					T	T		G	G	G													T		G	G	G	T	T			B			B				T	T	S	T	T											T	T		S	S						B			B			B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		167	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	V	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	W	L	S	Q
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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