Return to main results Retrieve Phyre Job Id

Job DescriptionP06616
Confidence99.62%DateThu Jan 5 10:59:16 GMT 2012
Rank185Aligned Residues160
% Identity16%Templatec1gwnA_
PDB info PDB header:gtpaseChain: A: PDB Molecule:rho-related gtp-binding protein rhoe; PDBTitle: the crystal structure of the core domain of rhoe/rnd3 - a2 constitutively activated small g protein
Resolution2.1 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.........
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  FIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDV
Query Conservation   




 









 
 
 


 

    


            

   



                        
Alig confidence 























































....



















Template Conservation 





   






       
      
                         ....                  
 
Template Sequence  KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSG. . . . SPYYDNVRPLSYPDSDAVLI
Template Known Secondary structure  STTSSS


SS



SSSSS

....SGGGTTTGGGG
TT
S
Template Predicted Secondary structure 




























....












Template SS confidence 















































































   25....30.........40.........50.........60.........70.........80 .........90.........100
 
   90.........100.........110.........120.........130....... ..140.........150.......
Predicted Secondary structure 























............







Query SS confidence 















































. . . . . . . . . . . .



















Query Sequence  ELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLP. . . . . . . . . . . . HLQFLASQMNFLDIVPISAE
Query Conservation                              
 








         ............             

 


 
Alig confidence 















































............



















Template Conservation    
                         




 

 

                          
         
 


Template Sequence  CFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSAL
Template Known Secondary structure  TT
T
TT

GGGGG
TTT




T
S

TT
Template Predicted Secondary structure 


































Template SS confidence 















































































   101........110.........120.........130.........140.........150.........160.........170.........180
 
   158.160 .........170...
Predicted Secondary structure 


.

Query SS confidence 


.












Query Sequence  TGL. NVDTIAAIVRKHL
Query Conservation   
 .


 
   
   
Alig confidence 


.












Template Conservation   
 


 
 
       
Template Sequence  QSENSVRDIFHVATLAC
Template Known Secondary structure  T
Template Predicted Secondary structure 



Template SS confidence 
















   181........190.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions