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Job DescriptionP06616
Confidence100.00%DateThu Jan 5 10:59:16 GMT 2012
Rank1Aligned Residues293
% Identity100%Templatec1egaB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protein (gtp-binding protein era); PDBTitle: crystal structure of a widely conserved gtpase era
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  DKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAAS
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Template Sequence  DKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAAS
Template Known Secondary structure 



SSSSST
S




S

SS
TTSSSS

T

TT
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  SSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVD
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Template Sequence  SSIGDVELVIFVVEGTRWTPDDEMVLNKLREGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVD
Template Known Secondary structure  S



TT


SSSS
SGGG
S
TTTS

S
TTTTTT
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  TIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQK
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Template Sequence  TIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQK
Template Known Secondary structure  T

B


SS
TT

S

SSTT
S
TT


SS
SSS
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   244.....250.........260.........270.........280.........290......
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Query Sequence  KMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLG
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Template Sequence  KMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLG
Template Known Secondary structure 
GGGSSSS
TT


S

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   244.....250.........260.........270.........280.........290......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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