Job Description P75969 Confidence 100.00% Date Thu Jan 5 12:16:36 GMT 2012 Rank 2 Aligned Residues 275 % Identity 36% Template d1p7da_ SCOP info DNA breaking-rejoining enzymes DNA breaking-rejoining enzymes Lambda integrase-like, catalytic core Resolution 2.95

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	T	S	T	W	L	D	R	Y	Q	A	I	Q	D	D	R	L	K	S	G	D	I	R	L	N	T	Y	K	Q	K	A	K	P	V	S	L	L	R	E	R	A	G	M	K	L	I	S	A	V	D	V	R	D	I	A	Q	L	L	D	E	Y	I	A	A	G	R	P	R	M	A	Q	V	V	R	S	V	L	I	D
Query Conservation
Alig confidence																	.	.	.	.																											.	.	.
Template Conservation																	.	.	.	.																											.	.	.
Template Sequence		M	T	L	H	S	W	L	D	R	Y	E	K	I	L	A	.	.	.	.	S	R	G	I	K	Q	K	T	L	I	N	Y	M	S	K	I	K	A	I	R	R	G	L	P	D	A	.	.	.	P	L	T	T	K	E	I	A	A	M	L	N	G	Y	I	D	E	G	K	A	A	S	A	K	L	I	R	S	T	L	S	D
Template Known Secondary structure																T	.	.	.	.		T	T																				S		S		.	.	.																	T	T
Template Predicted Secondary structure																	.	.	.	.																											.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.				.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	K	E	A	Q	H	Y	G	E	V	P	P	G	Y	N	P	A	L	A	T	K	Q	P	R	R	K	I	T	R	Q	R	L	S	L	E	E	W	K	K	I	F	D	I	A	D	A	T	H	R	Y	M	G	N	A	M	L	L	A	L	V	T	G	Q	R	L	G	D	I	S	R	M	K	F	S	D	I	W	D	D
Query Conservation
Alig confidence																																.	.
Template Conservation																																.	.
Template Sequence		A	F	R	E	A	I	A	E	G	H	I	T	T	N	H	V	A	A	T	R	A	A	K	S	E	V	R	R	S	R	.	.	L	T	A	D	E	Y	L	K	I	Y	Q	A	A	E	S	S	P	C	W	L	R	L	A	M	E	L	A	V	V	T	G	Q	R	V	G	D	L	C	E	M	K	W	S	D	I	V	D	G
Template Known Secondary structure									T	T	S		S			T	T	T	T	S												.	.													G	G	G	S																						T	T		B	G	G	G	B		S	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	H	V	I	Q	E	K	T	G	S	K	I	A	I	P	L	S	L	R	L	N	A	I	N	W	S	L	R	D	V	V	A	R	C	R	D	Y	A	V	S	A	Y	L	V	H	F	F	R	S	T	S	Q	A	E	R	G	A	Q	V	K	A	N	T	L	T	M	N	F	S	K	A	R	D	L	A	R	I	D	W
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.
Template Sequence		Y	L	Y	V	E	Q	S	K	T	G	V	K	I	A	I	P	T	A	L	H	I	D	A	L	G	I	S	M	K	E	T	L	D	K	C	K	E	I	.	.	.	.	.	.	.	L	G	G	E	T	I	I	A	S	T	R	R	E	P	L	S	S	G	T	V	S	R	Y	F	M	R	A	R	K	A	S	G	L	S	F
Template Known Secondary structure								T	T	T								T	T				T	T	T	T														.	.	.	.	.	.	.	T		S	S	B	S	S	B		T	T	S		B																		T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.								.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.				.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																											.	.	.
Query SS confidence																											.	.	.
Query Sequence		G	E	G	S	P	A	T	F	H	E	Q	R	S	L	S	E	R	L	Y	K	E	Q	G	L	D	.	.	.	T	Q	K	L	L	G	H	K	T	Q	Q	Q	T	D	R	Y	H	D	D	R	G	K	G	W	S	K	V	A	L
Query Conservation																											.	.	.
Alig confidence				.																	.						.	.	.																			.
Template Conservation				.																	.																											.
Template Sequence		E	G	.	D	P	P	T	F	H	E	L	R	S	L	S	A	R	L	Y	.	E	K	Q	I	S	D	K	F	A	Q	H	L	L	G	H	K	S	D	T	M	A	S	Q	R	D	D	.	R	G	R	E	W	D	K	I	E	I
Template Known Secondary structure		S	S	.	S				T	T											.				T												S	S										.	T	T	T	T	S
Template Predicted Secondary structure				.																	.																											.
Template SS confidence
		301	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions