Job Description P75969 Confidence 99.05% Date Thu Jan 5 12:16:36 GMT 2012 Rank 14 Aligned Residues 93 % Identity 28% Template c2oxoA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:integrase; PDBTitle: crystallization and structure determination of the core-2 binding domain of bacteriophage lambda integrase Resolution 2.00 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	T	S	T	W	L	D	R	Y	Q	A	I	Q	D	D	R	L	K	S	G	D	I	R	L	N	T	Y	K	Q	K	A	K	P	V	S	L	L	R	E	R	A	G	M	K	L	I	S	A	V	D	V	R	D	I	A	Q	L	L	D	E	Y	I	A	A	G	R	P	R	M	A	Q	V	V	R	S	V	L	I	D
Query Conservation
Alig confidence																		.	.	.	.
Template Conservation																		.	.	.	.
Template Sequence		M	T	L	H	S	W	L	D	R	Y	E	K	I	L	A	S	.	.	.	.	R	G	I	K	Q	K	T	L	I	N	Y	M	S	K	I	K	A	I	R	R	G	L	P	D	A	P	L	E	D	I	T	T	K	E	I	A	A	M	L	N	G	Y	I	D	E	G	K	A	A	S	A	K	L	I	R	S	T	L	S	D
Template Known Secondary structure			B															.	.	.	.																						S		S		B	G	G	G																T	T
Template Predicted Secondary structure																		.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	K	E	A	Q	H	Y	G	E	V	P	P	G	Y	N	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	R	E	A	I	A	E	G	H	I	T	T	N	H	V	A
Template Known Secondary structure									T	T	S		S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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