Job Description P75969 Confidence 98.58% Date Thu Jan 5 12:16:36 GMT 2012 Rank 22 Aligned Residues 112 % Identity 16% Template c2kkpA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:phage integrase; PDBTitle: solution nmr structure of the phage integrase sam-like2 domain from moth 1796 from moorella thermoacetica.3 northeast structural genomics consortium target mtr39k4 (residues 64-171). Resolution UNK

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.
Predicted Secondary structure																																									.																																.
Query SS confidence																																									.																																.
Query Sequence		K	G	K	A	I	T	T	S	T	W	L	D	R	Y	Q	A	I	Q	D	D	R	L	K	S	G	D	I	R	L	N	T	Y	K	Q	K	A	K	P	V	.	S	L	L	R	E	R	A	G	M	K	L	I	S	A	V	D	V	R	D	I	A	Q	L	L	D	E	Y	I	A	A	G	.	R	P	R	M	A	Q	V	V
Query Conservation																																									.																																.
Alig confidence																					.	.	.	.																	.																																.
Template Conservation																					.	.	.	.
Template Sequence		E	P	S	K	I	T	V	E	Q	W	L	N	R	W	L	T	D	Y	A	.	.	.	.	K	P	H	L	R	Q	S	T	W	E	S	Y	E	T	V	L	R	L	H	V	I	P	T	L	G	S	I	P	L	K	K	L	Q	P	A	D	I	Q	R	L	Y	A	S	K	L	E	S	G	L	S	P	T	R	V	R	Y	I
Template Known Secondary structure			S			S														T	.	.	.	.	S				S					S																T	S		T	T	T																T	T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	S	V	L	I	D	V	F	K	E	A	Q	H	Y	G	E	V	P	P	G	Y	N	P	A	L	A	T	K	Q	P	R	R	K	I	T	R	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	V	L	H	E	A	M	S	Q	A	R	E	S	G	L	L	L	Q	N	P	T	E	A	A	K	P	P	R	H	P	L	E	H	H	H	H	H
Template Known Secondary structure														T	T	T	S		S	S		G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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