Job Description P75969 Confidence 28.33% Date Thu Jan 5 12:16:36 GMT 2012 Rank 42 Aligned Residues 103 % Identity 15% Template c2h7fX_ PDB info PDB header:isomerase/dna Chain: X: PDB Molecule:dna topoisomerase 1; PDBTitle: structure of variola topoisomerase covalently bound to dna Resolution 2.70 Å

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		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.												230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.																		.	.	.													.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.																		.	.	.													.	.
Query Sequence		H	R	Y	M	G	N	A	M	L	L	A	L	V	T	G	Q	R	L	G	D	.	.	.	.	.	.	.	.	.	.	.	I	S	R	M	K	F	S	D	I	W	D	D	H	L	H	V	I	.	.	.	Q	E	K	T	G	S	K	I	A	I	P	L	.	.	S	L	R	L	N	A	I	N	W	S	L	R	D	V	V
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.																		.	.	.													.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.																		.	.	.													.	.												.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		N	Y	Q	L	A	V	F	M	L	M	E	T	M	F	F	I	R	F	G	K	M	K	Y	L	K	E	N	E	T	V	G	L	L	T	L	K	N	K	H	I	E	I	S	P	D	K	I	V	I	K	F	V	G	K	D	K	V	S	H	E	F	V	V	H	K	S	N	R	L	Y	K	P	L	L	K	L	.	.	.	.
Template Known Secondary structure																																	S	T	T		B	G	G	G					S	S									G	G	G									T	T	S	T	T								.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	C	R	D	Y	A	V	S	A	Y	L	V	H	F	F	R	S	T	S	Q	A	E	R	G	A	Q	V	K	A	N	T	L	T	M	N	F	S	K	A	R	D	L	A	R	I	D	W	G	E	G	S	P	A	T	F	H	E	Q	R	S	L	S	E	R	L	Y	K	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	D	S	S	P	E	E	F	L	F	N	K	L	S	E	R	K	V	Y	E	S	I	K	Q	F	.	.	.	.	.	.	.	.	.	.	.	.	G	I	R	I	K	D	L	R	T	Y	G	V	N	Y	T	F	L
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T		T	T	S	B	T	T	T	T											G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.													.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions