Job Description P75969 Confidence 47.32% Date Thu Jan 5 12:16:36 GMT 2012 Rank 40 Aligned Residues 108 % Identity 21% Template c2f4qA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:type i topoisomerase, putative; PDBTitle: crystal structure of deinococcus radiodurans topoisomerase ib Resolution 1.75 Å

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		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure																					.																			.	.	.													.
Query SS confidence																					.																			.	.	.													.
Query Sequence		H	R	Y	M	G	N	A	M	L	L	A	L	V	T	G	Q	R	L	G	.	D	I	S	R	M	K	F	S	D	I	W	D	D	H	L	H	V	I	.	.	.	Q	E	K	T	G	S	K	I	A	I	P	L	.	S	L	R	L	N	A	I	N	W	S	L	R	D	V	V	A	R	C	R	D	Y	A	V	S	A	Y
Query Conservation																					.																			.	.	.													.
Alig confidence																					.																			.	.	.													.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	V	X	A	L	X	T	R	L	L	H	V	A	R	F	R	V	T	Y	G	L	S	T	L	R	Q	R	H	V	V	V	D	G	N	T	V	T	F	R	F	K	G	K	H	G	V	S	Q	H	K	A	T	S	D	R	T	L	A	A	N	X	Q	K	L	L	D	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																							G	G	G		B	G	G	G					T	T									G	G	G																					T	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.						.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure																.	.	.	.	.
Query SS confidence																.	.	.	.	.
Query Sequence		L	V	H	F	F	R	S	T	S	Q	A	E	R	G	.	.	.	.	.	A	Q	V	K	A	N	T	L	T	M	N	F	S	K	A	R	D	L	A	R	I	D	W	G	E	G	S	P	A	T	F	H	E	Q	R	S	L	S	E	R	L	Y	K	E
Query Conservation																.	.	.	.	.
Alig confidence		.	.													.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																																		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	L	P	G	P	W	L	F	Q	T	V	D	A	G	G	G	E	R	R	R	I	H	S	T	E	L	N	A	Y	L	R	E	V	I	.	.	.	.	.	.	.	.	.	.	G	P	F	T	A	K	D	F	R	T	W	G	G	T	L	L	A	A
Template Known Secondary structure		.	.	S		S	S	B	S	S					S	S	S	S																			.	.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure		.	.																																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
				198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230											.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions