Job Description P75969 Confidence 77.92% Date Thu Jan 5 12:16:36 GMT 2012 Rank 34 Aligned Residues 118 % Identity 16% Template c2b9sA_ PDB info PDB header:isomerase/dna Chain: A: PDB Molecule:topoisomerase i-like protein; PDBTitle: crystal structure of heterodimeric l. donovani2 topoisomerase i-vanadate-dna complex Resolution 2.27 Å

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		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.												230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.				.	.	.	250	.	.			.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.														.					.	.	.							.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.														.					.	.	.							.	.
Query Sequence		E	E	W	K	K	I	F	D	I	A	D	A	T	H	R	Y	M	G	N	A	M	L	L	A	L	V	T	G	Q	R	L	G	D	.	.	.	.	.	.	.	.	.	.	.	I	S	R	M	K	F	S	D	I	W	D	D	H	.	L	H	V	I	.	.	.	Q	E	K	T	G	S	.	.	K	I	A	I	P	L	S
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.														.					.	.	.							.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.														.					.	.	.							.	.
Template Conservation
Template Sequence		A	S	Y	M	E	D	F	K	S	N	D	L	H	V	A	Q	R	A	V	A	M	Y	F	I	D	R	L	A	L	R	V	G	N	E	K	G	E	D	E	A	D	T	V	G	C	C	S	L	R	V	E	H	I	Q	L	M	P	D	N	I	V	R	F	D	F	L	G	K	D	S	I	R	Y	Q	N	D	V	A	V	L
Template Known Secondary structure								T	T		S																											T	T	S						G	G	G		B	G	G	G					T	T	S									G	G	G
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	N	A	I	N	W	S	L	R	D	V	V	A	R	C	R	D	Y	A	V	S	A	Y	L	V	H	F	F	R	S	T	S	Q	A	E	R	G	A	Q	V	K	A	N	T	L	T	M	N	F	S	K	A	R	D	L	A	R	I	D	W	G	E	G	S	P	A	T	F	H	E	Q	R	S	L	S	E	R	L
Query Conservation
Alig confidence														.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	V	Y	A	L	L	Q	R	F	T	R	.	.	.	.	.	.	R	K	S	P	G	M	D	I	F	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	L	N	P	T	Q	L	N	D	H	L	K	S	F	.	.	.	.	.	.	.	.	.	.	M	D	G	L	S	A	K	V	F	R	T	Y	N	A	S	I
Template Known Secondary structure													T	.	.	.	.	.	.	T			T	T	S	B	T	T	.	.	.	.	.	.	.	.	.	.	.	.	T	T											T	T	T	.	.	.	.	.	.	.	.	.	.	S	T	T			T	T
Template Predicted Secondary structure														.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		365	.	.	.	.	370	.	.	.	.	.	.							.	.	.	380	.	.	.	.	.													.	.	.	.	390	.	.	.	.	.	.	.	.	.	400											.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
		340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		417	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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