Job Description P75969 Confidence 72.75% Date Thu Jan 5 12:16:36 GMT 2012 Rank 38 Aligned Residues 139 % Identity 17% Template c1p4eB_ PDB info PDB header:dna binding protein/recombination/dna Chain: B: PDB Molecule:recombinase flp protein; PDBTitle: flpe w330f mutant-dna holliday junction complex Resolution 2.70 Å

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		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240										.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.																	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.																	.	.	.
Query Sequence		H	R	Y	M	G	N	A	M	L	L	A	L	V	T	G	Q	R	L	G	D	I	S	R	M	K	F	S	D	I	W	D	.	.	.	.	.	.	.	.	.	D	H	L	H	V	I	Q	E	K	T	G	S	K	I	A	I	.	.	.	P	L	S	L	R	L	N	A	I	N	W	S	L	R	D	V	V	A	R	C	R
Query Conservation																																	.	.	.	.	.	.	.	.	.																	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.																	.	.	.														.	.	.	.
Template Conservation																																																																										.	.	.	.
Template Sequence		K	T	L	Y	Q	F	L	F	L	A	T	F	I	N	C	G	R	F	S	D	I	K	N	V	D	P	K	S	F	K	L	V	Q	N	K	Y	L	G	V	I	I	Q	C	L	V	T	E	T	K	T	S	V	S	R	H	I	Y	F	F	S	A	R	G	R	I	D	P	L	V	Y	L	D	.	.	.	.	E	F	L	R
Template Known Secondary structure																T								T	B		G	G	G							T	T	T										S		T	T	S											S	S	S									.	.	.	.				T
Template Predicted Secondary structure																																																																										.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.			330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.		.	.	.	350	.	.
Predicted Secondary structure																																																						.	.																		.
Query SS confidence																																																						.	.																		.
Query Sequence		D	Y	A	V	S	A	Y	L	V	H	F	F	R	S	T	S	Q	A	E	R	G	A	Q	V	K	A	N	T	L	T	M	N	F	S	K	A	R	D	L	A	R	I	D	W	G	E	G	S	P	A	T	F	.	.	H	E	Q	R	S	L	S	E	R	L	Y	K	E	Q	G	L	D	.	T	Q	K	L	L	G
Query Conservation																																																						.	.																		.
Alig confidence																																																						.	.																		.
Template Conservation
Template Sequence		N	S	E	P	V	L	K	R	V	N	R	T	G	N	S	S	S	N	K	Q	E	Y	Q	L	L	K	D	N	L	V	R	S	Y	N	K	A	L	K	K	N	A	P	Y	P	I	F	A	I	K	N	G	P	K	S	H	I	G	R	H	L	M	T	S	F	L	S	M	K	G	L	T	E	L	T	N	V	V	G
Template Known Secondary structure		T										B	S					S	S			S			S	S		T	T												T		S	S	G	G	G	G	S	T	T			S	T	T													T	T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions