 |
Job Description | Q9JMR5 | Confidence | 19.59% | Date | Thu Jan 5 12:37:49 GMT 2012 |
Rank | 4 | Aligned Residues | 25 |
% Identity | 48% | Template | d1qhda2 |
SCOP info | Viral protein domain
| Viral protein domain
| Top domain of virus capsid protein
|
Resolution | 1.95 |
|
  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | |
|
|
. | . | . | . | . | . | . | . | 140 | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |
| . | . | . |
|  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | C | R | D | F | P | V | V | H | P | L | R | F | R | . |
. |
. |
G | L | T | L | Q | L | P | S | A | V | C |
Query Conservation |   |
|
|
|
|
|
|
|
|   |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|   |   |   |
|   |   |   |   |
|
|   |   |
|
|
|   |
|
|
|   |   |
|
Template Sequence |   |
V | A | A | L | F | P | N | A | Q | P | F | E | H | H | A | T | V | G | L | T | L | R | I | E | S | A | V | C |
Template Known Secondary structure |   |
 |  | T | T | S |
| S | S | S |
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
304 | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . |
  |
Send structure to FirstGlance for more viewing options
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|