Job Description Q47149 Confidence 100.00% Date Thu Jan 5 12:36:24 GMT 2012 Rank 2 Aligned Residues 88 % Identity 36% Template c2otrA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein hp0892; PDBTitle: solution structure of conserved hypothetical protein hp0892 from2 helicobacter pylori Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80
Predicted Secondary structure																																																																										.	.
Query SS confidence																																																																										.	.
Query Sequence		Q	R	D	I	E	Y	S	G	Q	Y	S	K	D	V	K	L	A	Q	K	R	H	K	D	M	N	K	L	K	Y	L	M	T	L	L	I	N	N	T	L	P	L	P	A	V	Y	K	D	H	P	L	Q	G	S	W	K	G	Y	R	D	A	H	V	E	P	D	W	I	L	I	Y	K	L	.	.	T	D	K	L	L	R
Query Conservation																																																																										.	.
Alig confidence																																								.																																		.	.
Template Conservation																																								.
Template Sequence		M	L	T	I	E	T	S	K	K	F	D	K	D	L	K	I	L	V	K	N	G	F	D	L	K	L	L	Y	K	V	V	G	N	L	A	T	E	Q	.	P	L	A	P	K	Y	K	D	H	P	L	K	G	G	L	K	D	F	R	E	C	H	L	K	P	D	L	L	L	V	Y	Q	I	K	K	Q	E	N	T	L	F
Template Known Secondary structure																									S													T		.		S	T	T	T	T							S	S			S								T	T									T	T	T	T
Template Predicted Secondary structure																																								.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	R	T	G	T	H	A	A	L	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	R	L	G	S	H	S	E	L	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions