Job Description P0C0L7 Confidence 1.98% Date Thu Jan 5 11:29:54 GMT 2012 Rank 45 Aligned Residues 220 % Identity 12% Template c3hd6A_ PDB info PDB header:membrane protein, transport protein Chain: A: PDB Molecule:ammonium transporter rh type c; PDBTitle: crystal structure of the human rhesus glycoprotein rhcg Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	K	K	V	K	P	I	T	L	R	D	V	T	I	I	D	D	G	K	L	R	K	A	I	T	A	A	S	L	G	N	A	M	E	W	F	D	F	G	V	Y	G	F	V	A	Y	A	L	G	K	V	F	F	P	G	A	D	P	S	V	Q	M	V	A	A	L	A	T	F	S	V	P	F	L	I	R	P	L	G
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Sequence		R	N	L	E	Q	S	K	E	R	Q	N	S	V	Y	.	.	.	.	.	.	.	.	Q	S	D	L	F	A	M	I	G	T	L	F	L	W	M	Y	W	P	S	F	N	.	.	.	.	.	.	.	.	.	.	S	A	I	S	Y	H	G	D	S	Q	H	R	A	A	I	N	T	Y	C	S	L	A	A	C	V	L	T
Template Known Secondary structure		T	T	G	G	G	G	T	T	T	S	S				.	.	.	.	.	.	.	.																					T	.	.	.	.	.	.	.	.	.	.	T	T	T		S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.									.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.											.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	F	F	G	M	L	G	D	K	Y	G	R	Q	K	I	L	A	I	T	I	V	I	M	S	I	S	T	F	C	I	G	L	I	P	S	Y	D	T	I	G	I	W	A	P	I	L	L	L	I	C	K	M	A	Q	G	F	S	V	G	G	E	Y	T	G	A	S	I	F	V	A	E	Y	S	P	D	R	K	R	G
Query Conservation
Alig confidence																																									.	.	.	.	.
Template Conservation																																									.	.	.	.	.
Template Sequence		S	V	A	I	S	S	A	L	H	K	K	G	K	L	D	M	V	H	I	Q	N	A	T	L	A	G	G	V	A	V	G	T	A	A	E	M	M	L	M	.	.	.	.	.	P	Y	G	A	L	I	I	G	F	V	C	G	I	I	S	T	L	G	F	V	Y	L	T	P	F	L	E	S	R	L	H	I	Q	D	T	C
Template Known Secondary structure									T	S	T	T											G	G	G						T	T	T	T	T	T	T		S		.	.	.	.	.																																			T	T
Template Predicted Secondary structure																																									.	.	.	.	.
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.						.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	G	S	W	L	D	F	G	S	I	A	G	F	V	L	G	A	G	V	V	V	L	I	S	T	I	V	G	E	A	N	F	L	D	W	G	W	R	I	P	F	F	I	A	L	P	L	G	I	I	G	L	Y	L	R	H	A	L	E	E	T	P	A	F	Q	Q	H	V	D	K	L	E	Q	G	D	R	E	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	N	N	L	H	G	I	P	G	I	I	G	G	I	V	G	A	V	T	A	A	S	D	W	T	A	R	T	Q	G	K	F	Q	I	Y	G	L	L	V	T	L	A	M	A	L	M	G	G	I	I	V	G	L	I	L	R	L	P	F	W	G	Q	P	S	D	E	N	C	F	E	D	A	V	Y	W	E	M	P	E
Template Known Secondary structure							T																																																			T	S	T	T	S					T	T	S	T	T		G	G	G	T	S				T
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		243	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	S
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		441	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions