Return to main results Retrieve Phyre Job Id

Job DescriptionP0C0L7
Confidence1.40%DateThu Jan 5 11:29:54 GMT 2012
Rank85Aligned Residues38
% Identity11%Templatec2ww9B_
PDB info PDB header:ribosomeChain: B: PDB Molecule:protein transport protein sss1; PDBTitle: cryo-em structure of the active yeast ssh1 complex bound to the2 yeast 80s ribosome
Resolution8.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50...
Predicted Secondary structure 



Query SS confidence 





































Query Sequence  TIIDDGKLRKAITAASLGNAMEWFDFGVYGFVAYALGK
Query Conservation          
        
      
          
  
Alig confidence 





































Template Conservation   


 


  
  
  


 


 


 









Template Sequence  KKPDLKEYTKIVKAVGIGFIAVGIIGYAIKLIHIPIRY
Template Known Secondary structure 



Template Predicted Secondary structure 



Template SS confidence 





































   40.........50.........60.........70.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions