Job Description P0ACB4 Confidence 85.52% Date Thu Jan 5 11:17:49 GMT 2012 Rank 92 Aligned Residues 82 % Identity 22% Template c3uk7B_ PDB info PDB header:transferase Chain: B: PDB Molecule:class i glutamine amidotransferase-like domain-containing PDBTitle: crystal structure of arabidopsis thaliana dj-1d Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																																	.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	T	L	I	L	F	S	T	R	D	G	Q	T	R	E	I	A	S	Y	L	A	S	E	L	K	E	L	G	I	Q	A	D	V	A	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	R	I	E	E	P	Q	W	E	N	Y	D
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.
Template Sequence		R	I	L	F	L	C	G	.	.	D	Y	X	E	D	Y	E	V	K	V	P	F	Q	S	L	Q	A	L	G	C	Q	V	D	A	V	C	P	E	K	K	A	G	D	R	C	P	T	A	I	H	D	F	E	G	D	Q	T	Y	S	E	K	P	G	H	T	F	A	L	T	T	N	F	D	D	L	V	S	S	S	Y	D
Template Known Secondary structure									.	.	T	T																	T								T	T			T	T												S	S	S	S													S		T	T	T			G	G	G		S
Template Predicted Secondary structure									.	.
Template SS confidence
		199	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		R	V	V	I	.	.	G	A	S	I	R	Y	G	H	Y	H	S	A	F	Q	E	F	V	K	K	H	A	T	R	L	N	S	M	P	S	A	F	Y	S	V	N
Query Conservation						.	.
Alig confidence						.	.																								.	.								.
Template Conservation																															.	.								.
Template Sequence		A	L	V	I	P	G	G	R	A	P	E	Y	L	A	L	N	E	H	V	L	N	I	V	K	E	F	X	N	S	.	.	E	K	P	V	A	S	I	.	H	G
Template Known Secondary structure								B	S						T	T														T	.	.	T							.		T
Template Predicted Secondary structure																															.	.								.
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.			.	.	.	.	310	.	.		.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions