 |
Job Description | P0ACB4 | Confidence | 61.49% | Date | Thu Jan 5 11:17:49 GMT 2012 |
Rank | 156 | Aligned Residues | 70 |
% Identity | 10% | Template | c3tpaA_ |
PDB info |
PDB header:heme binding protein | Chain: A: PDB Molecule:heme-binding protein a; |
PDBTitle: structure of hbpa2 from haemophilus parasuis
|
Resolution | 2.00 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
|
|
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | T | L | I | L | F | S | T | R | D | G | Q | T | R | E | I | A | S | Y | L | A | S | E | L | K | E | L | G | I | Q | A | D | V | A | N | V | H | R | . |
. |
. |
I | E | E | P | Q | W | E | N | Y | D | R | V | V | I | G | A | S | I | R | Y | G | H | Y | H | S | A | F | Q | E | F | V |
Query Conservation |   |
|
|   |
|
|
|
|   |
|   |
|
|   |
|   |   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |
|   |   |   |
|   |
|
|   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
I | W | V | Q | P | V | V | R | P | S | N | P | N | P | R | R | T | A | E | I | I | Q | A | D | W | A | K | I | G | V | K | A | K | L | V | T | H | E | W | A | D | F | N | K | R | T | R | E | G | E | F | A | A | G | T | Y | G | W | T | S | R | N | G | D | P | D | N | F | L | F | P | L | F |
Template Known Secondary structure |   |
 |  |
|
| S | S |
| B | T | T | B | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  |  |
| S | S |
|
| T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
355 | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|