Job Description P0ACB4 Confidence 31.34% Date Thu Jan 5 11:17:49 GMT 2012 Rank 242 Aligned Residues 39 % Identity 18% Template c3nohA_ PDB info PDB header:peptide binding protein Chain: A: PDB Molecule:putative peptide binding protein; PDBTitle: crystal structure of a putative peptide binding protein (rumgna_00914)2 from ruminococcus gnavus atcc 29149 at 1.60 a resolution Resolution 1.60 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	S	Y	L	A	S	E	L	K	E	L	G	I	Q	A	D	V	A	N	V	H	R	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	P	Q	W	E	N	Y	D	R	V	V	I	G	A
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	A	D	S	L	C	E	R	L	N	D	A	G	A	D	V	Q	I	K	Q	Y	S	G	T	X	L	R	S	R	A	V	S	G	K	Y	E	A	F	L	S	E	S	D	L	V	S	T	D	A	L	E	N	A	D	Y	I	I	L	D	S
Template Known Secondary structure													T	T																				T			S						T	T	S	S							T	S							G
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions