Job Description P0ACB4 Confidence 27.71% Date Thu Jan 5 11:17:49 GMT 2012 Rank 273 Aligned Residues 161 % Identity 12% Template c3fozB_ PDB info PDB header:transferase/rna Chain: B: PDB Molecule:trna delta(2)-isopentenylpyrophosphate transferase; PDBTitle: structure of e. coli isopentenyl-trna transferase in complex with e.2 coli trna(phe) Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.									.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																	.																								.	.	.	.	.	.	.	.
Query SS confidence																	.																								.	.	.	.	.	.	.	.
Query Sequence		M	K	T	L	I	L	F	S	T	R	D	G	Q	T	R	.	E	I	A	S	Y	L	A	S	E	L	K	E	L	G	I	Q	A	D	V	A	N	V	H	.	.	.	.	.	.	.	.	R	I	E	E	P	Q	W	E	N	Y	D	R	V	V	I	G	A	S	I	R	Y	G	H	Y	H	S	A	F	Q	E	F	V	K
Query Conservation																	.																								.	.	.	.	.	.	.	.
Alig confidence																	.																								.	.	.	.	.	.	.	.																									.	.
Template Conservation																																																																									.	.
Template Sequence		L	P	K	A	I	F	L	M	G	P	T	A	S	G	K	T	A	L	A	I	E	L	R	K	I	L	P	V	E	L	I	S	V	D	S	A	L	I	Y	K	G	M	D	I	G	T	A	K	P	N	A	E	E	L	L	A	A	P	H	R	L	L	D	I	R	D	P	S	Q	A	Y	.	.	S	A	A	D	F	R	R
Template Known Secondary structure												S	S	S										T	T	T	S									S	S	T	T	B	T	T			T	T	T	T				T	T					S				S	S	S		B		T	T	S			.	.
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.
		72	.	.	.				.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.
Query SS confidence						.	.	.
Query Sequence		K	H	A	T	.	.	.	R	L	N	S	M	P	S	A	F	Y	S	V	N	L	V	A	R	K	P	E	K	R	T	P	Q	T	N	S	Y	A	R	K	F	L	M	N	S	Q	W	R	P	D	R	C	A	V	I	A	G	A	L	R	Y	P	R	Y	R	W	Y	D	R	F	M	I	K	L	I	M	K	M	S	G	G
Query Conservation						.	.	.
Alig confidence						.	.	.																.	.	.	.	.	.	.	.	.	.	.																																													.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.																																													.	.	.
Template Sequence		D	A	L	A	E	M	A	D	I	T	A	A	G	R	I	P	L	L	V	G	G	T	.	.	.	.	.	.	.	.	.	.	.	M	L	Y	F	K	A	L	L	E	G	L	S	P	L	P	S	A	D	P	E	V	R	A	R	I	E	Q	Q	A	A	E	Q	G	W	E	S	L	H	R	Q	L	Q	E	V	.	.	.
Template Known Secondary structure													T	T								S		.	.	.	.	.	.	.	.	.	.	.																																													.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																																													.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.												.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	D	T	R	K	E	V	V	Y	T	D	W	E	Q	V	A	N	F	A	R	E	I	A	H	L	T	D	K	P
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		D	P	V	A	A	A	R	I	H	P	N	D	P	Q	R	L	S	R	.	A	L	E	V	F	F	I	S	G	K	T
Template Known Secondary structure									S		T	T								.									S	S
Template Predicted Secondary structure																				.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions