Job Description P0ACB4 Confidence 99.32% Date Thu Jan 5 11:17:49 GMT 2012 Rank 44 Aligned Residues 115 % Identity 15% Template c2x2oA_ PDB info PDB header:flavoprotein Chain: A: PDB Molecule:nrdi protein; PDBTitle: the flavoprotein nrdi from bacillus cereus with the2 initially oxidized fmn cofactor in an intermediate3 radiation reduced state Resolution 1.13 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence		T	L	I	L	F	S	T	R	D	G	Q	T	R	E	I	A	S	Y	L	A	S	E	L	K	E	L	G	I	Q	A	D	V	A	N	V	H	R	I	E	E	P	Q	W	E	N	Y	D	R	V	V	I	G	A	S	I	R	Y	.	G	H	Y	H	S	A	F	Q	E	F	V	K	K	H	A	T	R	L	N	S	M	P
Query Conservation																																																											.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.																		.																	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template Sequence		M	L	V	A	Y	D	S	M	T	G	N	V	K	R	F	I	H	K	L	N	M	P	A	V	Q	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	L	V	I	D	E	D	F	I	L	I	T	Y	T	T	G	F	G	N	V	P	E	R	V	L	D	F	L	E	R	N	N	E	.	.	.	.	K	L
Template Known Secondary structure									S	S	S										T	S							.	.	.	.	.	.	.	.	.	.	.	.	.	S	S					S									B	T	T	T	B													G	G	.	.	.	.	G
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.														.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		S	A	F	Y	S	V	N	L	V	A	R	K	P	E	K	R	T	.	P	Q	T	N	S	Y	A	R	K	F	L	M	N	S	Q	W	R	P	D	R	C	A	V	I	A	G	A	L	R	Y	P	R	Y	R	W	Y	D	R	F	M	I	K	L	I	M	K	M	S	G	G	E	T	D	T	R	K	E	V	V	Y	T	D
Query Conservation																			.
Alig confidence									.	.	.	.	.	.					.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	V	S	A	S	G	.	.	.	.	.	.	N	R	N	W	G	D	M	F	G	A	S	A	D	K	I	S	T	K	Y	E	V	P	I	V	S	K	F	E	L	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	N	D
Template Known Secondary structure									.	.	.	.	.	.		G	G	G	G	G	G	T	T											T									T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70							.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																																	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	E	Q	V	A	N	F	A	R	E	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	Y	F	K	E	R	V	R	E	I	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions