Job Description P0ACB4 Confidence 99.85% Date Thu Jan 5 11:17:49 GMT 2012 Rank 5 Aligned Residues 163 % Identity 18% Template c2wc1A_ PDB info PDB header:electron transport Chain: A: PDB Molecule:flavodoxin; PDBTitle: three-dimensional structure of the nitrogen fixation2 flavodoxin (niff) from rhodobacter capsulatus at 2.2 a Resolution 2.17 Å

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		1	.		.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure				.																																																										.																		.	.
Query SS confidence				.																																																										.																		.	.
Query Sequence		M	K	.	T	L	I	L	F	S	T	R	D	G	Q	T	R	E	I	A	S	Y	L	A	S	E	L	K	E	L	G	I	Q	A	D	V	A	N	V	H	R	I	E	E	P	Q	W	E	N	Y	D	R	V	V	I	G	A	S	I	R	Y	.	G	H	Y	H	S	A	F	Q	E	F	V	K	K	H	A	T	R	.	.
Query Conservation				.																																																										.																		.	.
Alig confidence				.																										.																																.																		.	.
Template Conservation																														.
Template Sequence		M	A	K	I	G	L	F	F	G	S	D	T	G	T	T	R	K	I	A	K	Q	I	K	D	M	F	D	D	.	E	V	M	A	K	P	L	N	V	N	R	A	D	V	A	D	F	M	A	Y	D	F	L	I	L	G	T	P	T	L	G	D	G	Q	L	P	G	L	S	A	N	A	A	S	E	S	W	E	E	F	L
Template Known Secondary structure				S								S	S	S											T	T	S		T	.	T	T	B						G	G	G										S									B	T	T	T	B		S	S	G	G	G	T		S	S							G
Template Predicted Secondary structure																														.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
									77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	L	N	S	M	P	S	A	F	Y	S	V	N	L	V	A	R	K	P	E	K	R	T	P	Q	T	N	S	Y	A	R	K	F	L	M	N	S	Q	W	R	P	D	R	C	A	V	I	A	G	A	L	R	Y	P	R	Y	R	W	Y	D	R	F	M	I	K	L	I	M	K	M	S	G	G	E
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																				.																						.	.	.	.	.	.																					.
Template Conservation																												.																						.	.	.	.	.	.																					.
Template Sequence		P	R	I	A	D	Q	D	F	S	G	K	T	I	A	L	F	G	L	G	D	Q	V	T	Y	P	L	.	E	F	V	N	A	L	F	F	L	H	E	F	F	S	D	R	G	A	N	V	V	.	.	.	.	.	.	G	R	W	P	A	K	G	Y	G	F	E	D	S	L	A	V	V	E	G	E	.	F	L	G	L	A
Template Known Secondary structure		G	G	G	T	T				T	T											T	T	T		T	T	.	S	T	T	T											T	T	T					.	.	.	.	.	.						T	T	S			S			T	T			T	T		.		S	S
Template Predicted Secondary structure																												.																						.	.	.	.	.	.																					.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	T	R	K	E	V	V	Y	T	D	W	E	Q	V	A	N	F	A	R	E	I	A	H
Query Conservation
Alig confidence													.
Template Conservation													.
Template Sequence		L	D	Q	D	N	Q	A	A	L	T	P	.	E	R	L	K	G	W	L	S	L	I	A	A
Template Known Secondary structure				T	T	T		G	G	G			.										T
Template Predicted Secondary structure													.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.		.	.	.	.	.	.	.	170	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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