Return to main results Retrieve Phyre Job Id

Job DescriptionP54901
Confidence88.22%DateThu Jan 5 12:06:05 GMT 2012
Rank140Aligned Residues40
% Identity8%Templated3deua1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50......
Predicted Secondary structure 








Query SS confidence 







































Query Sequence  RCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGR
Query Conservation     

  

      

  

  
 

 


  


 
  
Alig confidence 







































Template Conservation     

  
       
   

  
      

  
  
  
Template Sequence  HWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLED
Template Known Secondary structure  S
SSTS
Template Predicted Secondary structure 








Template SS confidence 







































   34.....40.........50.........60.........70...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions