 |
Job Description | P54901 | Confidence | 70.16% | Date | Thu Jan 5 12:06:05 GMT 2012 |
Rank | 278 | Aligned Residues | 39 |
% Identity | 10% | Template | d1vola1 |
SCOP info | Cyclin-like
| Cyclin-like
| Transcription factor IIB (TFIIB), core domain
|
Resolution | 2.70 |
|
  |   |
18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | Q | I | L | L | T | L | F | Q | P | G | L | T | A | T | M | A | T | F | S | E | L | N | G | V | D | D | D | I | A | S | L | D | I | S | E | T | G | R | E | I |
Query Conservation |   |
  |   |
|
|   |   |
|
|   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |
|
|   |
|
|
|   |   |
|
|
|   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|
|   | . | . |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |
|   |   |   |
|
Template Sequence |   |
L | Y | I | A | C | R | Q | . |
. |
E | G | V | P | R | T | F | K | E | I | C | A | V | S | R | I | S | K | K | E | I | G | R | C | F | K | L | I | L | K | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | . | . | T | T |
|
|
|
|  |  |  |  |  | T | T | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
164 | . | . | . | . | . | 170 | |
|
. | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|