 |
Job Description | P54901 | Confidence | 79.45% | Date | Thu Jan 5 12:06:05 GMT 2012 |
Rank | 223 | Aligned Residues | 40 |
% Identity | 5% | Template | d1hsja1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| MarR-like transcriptional regulators
|
Resolution | 2.30 |
|
  |   |
17 | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | C | Q | I | L | L | T | L | F | . |
Q | P | G | L | T | A | T | M | A | T | F | S | E | L | N | G | V | D | D | D | I | A | S | L | D | I | S | E | T | G | R |
Query Conservation |   |
  |   |   |
|
|   |   |
|
| . |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |
|
|   |
|
|
|   |   |
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|
|   |   |
|   |   |
|   |   |
Template Sequence |   |
E | I | Y | I | L | N | H | I | L | R | S | E | S | N | E | I | S | S | K | E | I | A | K | C | S | E | F | K | P | Y | Y | L | T | K | A | L | Q | K | L | K | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
| S |
| S |  |  |  |  |  |  |  |  |  | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
406 | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|