Return to main results Retrieve Phyre Job Id

Job DescriptionP54901
Confidence76.91%DateThu Jan 5 12:06:05 GMT 2012
Rank238Aligned Residues55
% Identity18%Templated1b9ma1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain N-terminal domain of molybdate-dependent transcriptional regulator ModE
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.......
Predicted Secondary structure 














Query SS confidence 





























































Query Sequence  RRCQILLTLFQPGLTATMATFSELNGVDDDIASLDISETGREILRYHQLTLTTGYDGSYRVE
Query Conservation 
   

  

      

  

  
 

 


  


 
   
     
 
      
  
 
Alig confidence 












...


























....














Template Conservation    
  
 

   
...
   

  
  
   

  
  

  
....
  

 
   
  

Template Sequence  RRISLLKHIALSG. . . SISQGAKDAGISYKSAWDAINEXNQLS. . . . EHILVERATGGAVLT
Template Known Secondary structure  S...ST

....TS






Template Predicted Secondary structure 
...


....





Template SS confidence 





























































   20.........30.. .......40.........50......... 60.........70....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions