Job Description P54901 Confidence 46.69% Date Thu Jan 5 12:06:05 GMT 2012 Rank 395 Aligned Residues 101 % Identity 12% Template c3oopA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:lin2960 protein; PDBTitle: the structure of a protein with unknown function from listeria innocua2 clip11262 Resolution 1.78 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Q	I	L	L	T	L	F	Q	P	G	L	T	A	T	M	A	T	F	S	E	L	N	G	V	D	D	D	I	A	S	L	D	I	S	E	T	G	R	E	I	L	R	Y	H	Q	L	T	L	T	T	G	Y	D	G	S	Y	R	V	E	G	T	V	L	N	Q	R	L	C	L	F	H	W	L	R	R	G	F	R	L
Query Conservation
Alig confidence																																									.	.	.				.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.				.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	W	S	V	L	E	G	I	E	A	N	E	P	I	S	Q	K	E	I	A	L	W	T	K	K	D	T	P	T	V	N	R	I	V	D	V	L	L	R	.	.	.	K	E	L	.	.	.	I	V	R	E	I	R	R	I	S	L	L	S	L	T	D	K	G	R	K	E	T	T	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													S	S											T																.	.	.	T	T	S	.	.	.								S															.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.				.	.	.																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.				.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	S	F	I	T	S	Q	F	T	P	A	L	K	S	E	L	K	R	R	G	I	A	R	N	F	Y	D	D	T	N	L	Q	A	L	V	N	L	C	S	R	R	L	Q	K	R	F	E	S	R	D	I	H	F	L	C	L	Y	L	Q	Y	C	L	L	Q	H	H
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L	R	D	I	V	E	A	S	C	E	K	X	F	A	G	V	T	R	T	D	L	E	Q	F	T	A	I	L	K	N	I	S	T	N	I	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions