Job Description P54901 Confidence 41.14% Date Thu Jan 5 12:06:05 GMT 2012 Rank 443 Aligned Residues 82 % Identity 13% Template c3nhzA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:two component system transcriptional regulator mtra; PDBTitle: structure of n-terminal domain of mtra Resolution 2.50 Å

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		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.												.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	Q	I	I	L	L	T	G	N	D	S	E	R	E	A	Q	I	E	Q	Q	L	R	E	L	T	L	L	P	L	N	I	K	H	M	S	V	K	A	F	L	Q	T	G	A	P	R	G	A	A	L	I	I	A	P	Y	T	M	P	.	.	.	.	.	.	.	.	.	.	.	L	P	L	F	S	P	P	L	I	Y	T
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.
Template Sequence		R	Q	R	I	L	V	V	D	D	D	A	S	L	A	E	M	L	T	I	V	L	R	G	E	.	.	G	F	D	T	A	V	I	G	D	G	T	Q	A	L	T	A	V	R	E	L	R	P	D	L	V	L	L	D	L	M	L	P	G	M	N	G	I	D	V	C	R	V	L	R	A	D	S	G	V	P	I	V	M	L
Template Known Secondary structure										S															T	.	.	T									G	G	G											S						S	S		S	S	S
Template Predicted Secondary structure																										.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	T	L	T	T	H	Q	Q	E	Q	I	R	K	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	K	T	D	T	V	D	V	V	L	G	L	E	S
Template Known Secondary structure				T	T		S	S								T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions